WormBase Tree Display for Variation: WBVar02133522
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WBVar02133522 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h10295 | ||||
Other_name | Y54G2A.50.3:c.377G>A | |||||
Y54G2A.50.1:c.377G>A | ||||||
Y54G2A.50.2:c.377G>A | ||||||
CE38902:p.Gly126Asp | ||||||
HGVSg | CHROMOSOME_IV:g.2919296G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||
Flanking_sequences | TGCTTCATCGTCTTCATCTTCGGATTCGAAAGGAGATTCG | CGATGGTCGTCACTGTCACTACTTGAATGACAAGAAGCGA | ||||
Mapping_target | CHROMOSOME_IV | |||||
Source_location | 200 | CHROMOSOME_IV | 2919293 | 2919293 | ||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023777 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00044493 | ||||
Transcript | Y54G2A.50.3 (11) | |||||
Y54G2A.50.2 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
PolyPhen | 0 | unknown | ||||
HGVSc | Y54G2A.50.2:c.377G>A | |||||
HGVSp | CE38902:p.Gly126Asp | |||||
cDNA_position | 549 | |||||
CDS_position | 377 | |||||
Protein_position | 126 | |||||
Exon_number | 6/7 | |||||
Codon_change | gGc/gAc | |||||
Amino_acid_change | G/D | |||||
Y54G2A.50.1 (11) | ||||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |