WormBase Tree Display for Variation: WBVar02133538

WBVar02133538 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h6518
    Other_name: Y54G2A.3b.1:c.328C>T
      CE27491:p.Pro112Ser
      Y54G2A.3a.1:c.334C>T
      CE41729:p.Pro110Ser
    HGVSg: CHROMOSOME_IV:g.3014111C>T
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: CAGTTCTTCAGTGTCGCTGAGAAGACGTCCGAAAAAGAAG CGTCCATGAAAGAGCACAGTTCTTCTGCTCCAGTGCTCTC
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 3014108 3014108
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023694
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00021869
    Transcript: Y54G2A.3a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: Y54G2A.3a.1:c.334C>T
        HGVSp: CE27491:p.Pro112Ser
        cDNA_position: 450
        CDS_position: 334
        Protein_position: 112
        Exon_number: 4/5
        Codon_change: Ccg/Tcg
        Amino_acid_change: P/S
      Y54G2A.3b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: Y54G2A.3b.1:c.328C>T
        HGVSp: CE41729:p.Pro110Ser
        cDNA_position: 423
        CDS_position: 328
        Protein_position: 110
        Exon_number: 4/5
        Codon_change: Ccg/Tcg
        Amino_acid_change: P/S
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose