WormBase Tree Display for CDS: Y37D8A.23c
expand all nodes | collapse all nodes | view schema
| Y37D8A.23c | SMap | S_parent | Sequence | Y37D8A | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 30 | |||
| 2273 | 2400 | |||||
| 3311 | 3539 | |||||
| 5172 | 5822 | |||||
| 6598 | 6792 | |||||
| 6958 | 7026 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q8I4D9 | ||
| UniProt | UniProtAcc | Q8I4D9 | ||||
| AlphaFold | entry | Q8I4D9 | ||||
| NCBI_protein | GI_number | GI:24817573 | ||||
| Protein_id | CHROMOSOME_III | CAD45606 | 2 | |||
| DB_remark | UNC-25 protein; contains similarity to Pfam domain PF00282 (Pyridoxal-dependent decarboxylase conserved domain); contains similarity to Interpro domains IPR002129 (Pyridoxal phosphate-dependent decarboxylase), IPR015424 (Pyridoxal phosphate-dependent transferase), IPR015421 (Pyridoxal phosphate-dependent transferase, major domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | NDB | AU209235 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00006762 | ||||
| Corresponding_transcript | Y37D8A.23c.1 | |||||
| Corresponding_protein | CE32012 | |||||
| Corresponding_PCR_product | cenix:322-e3 | |||||
| mv_AAD19958 | ||||||
| sjj_Y37D8A.23 | ||||||
| Corresponding_oligo_set (21) | ||||||
| Matching_cDNA | L1_Nanopore_Roach_13529 | |||||
| L3_Nanopore_Roach_14243 | ||||||
| L3_Nanopore_Roach_13105 | ||||||
| L2_Nanopore_Roach_14525 | ||||||
| adult_Nanopore_Roach_87833 | ||||||
| male_Nanopore_Roach_14867 | ||||||
| L1_Nanopore_Roach_12323 | ||||||
| L2_Nanopore_Roach_56074 | ||||||
| L4_Nanopore_Roach_8247 | ||||||
| L2_Nanopore_Roach_13315 | ||||||
| RNAi_result | WBRNAi00090105 | |||||
| WBRNAi00077589 | ||||||
| WBRNAi00077586 | ||||||
| WBRNAi00027872 | ||||||
| WBRNAi00089945 | ||||||
| WBRNAi00002293 | ||||||
| WBRNAi00055883 | ||||||
| WBRNAi00090263 | ||||||
| WBRNAi00089782 | ||||||
| Microarray_results (27) | ||||||
| Brief_identification | Glutamate decarboxylase | Accession_evidence | UniProt | TR:Q8I4D9 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | [020829 ar2] 2nd and 3rd exons spliced out based on EST yk1012c10.5 | Curator_confirmed | WBPerson1847 | |||
| Method | curated |
