WormBase Tree Display for CDS: Y47D3A.29
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| Y47D3A.29 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y47D3A | ||
| Structure | Source_exons | 1 | 144 | ||
| 192 | 285 | ||||
| 337 | 2681 | ||||
| 3532 | 4118 | ||||
| 5494 | 5837 | ||||
| 6888 | 7072 | ||||
| 7127 | 7216 | ||||
| 9361 | 9509 | ||||
| 10142 | 10341 | ||||
| 11349 | 11497 | ||||
| DB_info | Database | KEGG | KEGG_id | 2.7.7.7 | |
| TrEMBL | UniProtAcc | Q9NAH1 | |||
| UniProt | UniProtAcc | Q9NAH1 | |||
| AlphaFold | entry | Q9NAH1 | |||
| NCBI_protein | GI_number | GI:25005148 | |||
| Protein_id | CHROMOSOME_III | CAB97239 | 2 | ||
| DB_remark | POLA-1 protein; contains similarity to Pfam domains PF00136 (DNA polymerase family B), PF03104 (DNA polymerase family B, exonuclease domain), PF08996 (DNA Polymerase alpha zinc finger), PF12254 (DNA polymerase alpha subunit p180 N terminal); contains similarity to Interpro domains IPR042087 (DNA polymerase family B, thumb domain), IPR043502 (DNA/RNA polymerase superfamily), IPR006133 (DNA-directed DNA polymerase, family B, exonuclease domain), IPR015088 (Zinc finger, DNA-directed DNA polymerase, family B, alpha), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR024647 (DNA polymerase alpha catalytic subunit, N-terminal domain), IPR006172 (DNA-directed DNA polymerase, family B), IPR006134 (DNA-directed DNA polymerase, family B, multifunctional domain), IPR023211 (DNA polymerase, palm domain superfamily), IPR038256 (DNA polymerase alpha, zinc finger domain superfamily) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible (12) | |||||
| Associated_feature | WBsf127747 | ||||
| Method | curated |
