WormBase Tree Display for Expression_cluster: [cgc5767]:cluster_46
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| [cgc5767]:cluster_46 | Description | Early embryonic development gene expression profile. |
|---|---|---|
| Species | Caenorhabditis elegans | |
| Algorithm | QT clustering | |
| Reference | WBPaper00005767 | |
| Microarray_results | Aff_B0035.14 | |
| Aff_F59E12.10 | ||
| Aff_K01D12.12 | ||
| Aff_T06E4.3 | ||
| Aff_Y25C1A.A | ||
| Aff_Y41C4A.10 | ||
| Aff_Y75B8A.NN | ||
| Gene | WBGene00001019 | |
| WBGene00019125 | ||
| WBGene00010471 | ||
| WBGene00000226 | ||
| WBGene00021296 | ||
| WBGene00001235 | ||
| WBGene00004085 | ||
| Attribute_of | Microarray_experiment (12) | |
| Remark | Clusters were generated by the QT clustering algorithm. The algorithm assembles a series of clusters ordered by size, largest first, with no limit on the number of clusters other than the coherence (cluster diameter) defined a priori (0.7 in our clusters). To ensure robust clusters the distance metric used for clustering was 1-Ravg , where Ravg was the average Pearson correlation coefficient between moving average profiles over 20 realizations of the data plus simulated noise. Noise was generated by a two-component model consisting of an additive Gaussian background with standard deviation 2 ppm, and a multiplicative Gaussian sampling error with s.d.=0.1. Simulated data were floored at 1 ppm. | |
| Type: Co-expression Cluster |
