WormBase Tree Display for Expression_cluster: WBPaper00046853:AOBr_LakeStobenseeAug_downregulated
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| WBPaper00046853:AOBr_LakeStobenseeAug_downregulated | Description | Genes that showed significantly decreased expression after exposure to adsorbable organic bromine compounds (AOBr) contained in water samples collected from Lake Stobensee in Berlin in August. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Differentially expressed genes (DEGs) were identified with a random variance t-test and a significance analysis of microarrays (SAM) test. Genes were considered statistically significant if their p-value was less than 0.05, the false discovery rate less than 0.3, and the fold change compared to control at least <= 0.67 or >=1.5. | ||
| Reference | WBPaper00046853 | ||
| Microarray_results | 177932_at | Fold change: 0.15 | |
| 193786_at | Fold change: 0.2 | ||
| 193337_s_at | Fold change: 0.26 | ||
| 191522_s_at | Fold change: 0.28 | ||
| 188702_at | Fold change: 0.29 | ||
| 188610_at | Fold change: 0.31 | ||
| 194000_at | Fold change: 0.31 | ||
| 178952_at | Fold change: 0.33 | ||
| 179422_s_at | Fold change: 0.34 | ||
| 185377_at | Fold change: 0.34 | ||
| 177469_at | Fold change: 0.36 | ||
| 193261_at | Fold change: 0.36 | ||
| 183161_at | Fold change: 0.38 | ||
| Gene | WBGene00005424 | ||
| WBGene00006331 | |||
| WBGene00016329 | |||
| WBGene00016108 | |||
| WBGene00021611 | |||
| WBGene00010169 | |||
| WBGene00010851 | |||
| WBGene00003086 | |||
| WBGene00008368 | |||
| WBGene00007851 | |||
| WBGene00010974 | |||
| Attribute_of | Microarray_experiment | WBPaper00046853:Water(Control)_rep1 | |
| WBPaper00046853:Water(Control)_rep2 | |||
| WBPaper00046853:Water(Control)_rep3 | |||
| WBPaper00046853:Z-Medium(Control)_rep1 | |||
| WBPaper00046853:Z-Medium(Control)_rep2 | |||
| WBPaper00046853:Z-Medium(Control)_rep3 | |||
| WBPaper00046853:Lake-Stobensee-sample-August_rep1 | |||
| WBPaper00046853:Lake-Stobensee-sample-August_rep2 | |||
| WBPaper00046853:Lake-Stobensee-sample-August_rep3 | |||
| WBPaper00046853:Lake-Stobensee-sample-October_rep1 | |||
| WBPaper00046853:Lake-Stobensee-sample-October_rep2 | |||
| WBPaper00046853:Lake-Stobensee-sample-October_rep3 | |||
| WBPaper00046853:M.aeruginosa-batch-culture_rep1 | |||
| WBPaper00046853:M.aeruginosa-batch-culture_rep2 | |||
| WBPaper00046853:M.aeruginosa-batch-culture_rep3 | |||
| Regulation | Regulated_by_molecule | WBMol:00005486 | |
| Associated_with | Life_stage | WBls:0000064 |
