WormBase Tree Display for Gene: WBGene00000088
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WBGene00000088 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F32A7 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | aex-5 | Person_evidence | WBPerson655 | |||||
Sequence_name | F32A7.6 | ||||||||
Molecular_name | F32A7.6 | ||||||||
F32A7.6.1 | |||||||||
CE28554 | |||||||||
Other_name | kpc-3 | ||||||||
kpc-5 | |||||||||
CELE_F32A7.6 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | aex-5 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | aex | ||||||||
Allele (170) | |||||||||
Legacy_information | [Jim Thomas] Defecation defective, moderate to severe constipation, expulsion muscle contraction (Exp) missing in about 9 of 10 defecation cycles, anterior body contraction (aBoc) usually missing as well, adult males unaffected and mate well. | ||||||||
See also sa23, sa41, sa42, sa43 | |||||||||
[C.elegansII] sa23 : defecation defective, moderate to severe constipation, expulsion muscle contraction (Exp) missing in about 9 of 10 defecation cycles, anterior body contraction (aBoc) usually missing as well, adult males unaffected and mate well. OA3: sa41, sa42, sa43 (all similar) [Thomas 1990; JT] | |||||||||
Strain | WBStrain00022773 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (29) | |||||||||
Ortholog (47) | |||||||||
Paralog | WBGene00001172 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000254 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00002232 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00017686 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | an ortholog of calcium-dependent serine endoproteinases, the kex2/subtilisin-like proprotein convertase that affects defecation cycle and anterior body contractions; and is expressed in all muscle cells except pharyngeal muscles. | Paper_evidence | WBPaper00004142 | |||||
Curator_confirmed | WBPerson480 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables serine-type endopeptidase activity. Involved in several processes, including neuropeptide processing; positive regulation of synaptic assembly at neuromuscular junction; and positive regulation of transport. Located in extracellular space. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F32A7.6 | |||||||
Corresponding_CDS_history | F32A7.6:wp56 | ||||||||
Corresponding_transcript | F32A7.6.1 | ||||||||
Other_sequence | Oden_isotig22904 | ||||||||
Acan_isotig14016 | |||||||||
Tcir_isotig22927 | |||||||||
CJC17003_1 | |||||||||
Associated_feature | WBsf649782 | ||||||||
WBsf220659 | |||||||||
WBsf220660 | |||||||||
Experimental_info (8) | |||||||||
Map_info | Map | I | Position | 27.9582 | Error | 0.002256 | |||
Well_ordered | |||||||||
Positive | Positive_clone | F32A7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 1479 | |||||||
1697 | |||||||||
Pos_neg_data | 4754 | ||||||||
4755 | |||||||||
4756 | |||||||||
4757 | |||||||||
4758 | |||||||||
4759 | |||||||||
4760 | |||||||||
Reference (34) | |||||||||
Remark | Sequence connection from [Thacker C] | ||||||||
old_name kpc-5 becomes new_name aex-5 from [Thacker C]. | |||||||||
Method | Gene |