WormBase Tree Display for Gene: WBGene00018175

WBGene00018175 SMap: S_parent: Sequence: F38B6
  Identity: Version: 1
    Name: Sequence_name: F38B6.6
      Molecular_name: F38B6.6
        F38B6.6.1
        CE30976
      Other_name: CELE_F38B6.6 Accession_evidence: NDB BX284606
      Public_name: F38B6.6
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (106)
    Strain: WBStrain00032905
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog (35)
    Paralog: WBGene00000244 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003858 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003885 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017983 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021444 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021613 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00043992 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable dolichyl-phosphate-mannose-protein mannosyltransferase activity. Predicted to be involved in endoplasmic reticulum unfolded protein response and protein O-linked mannosylation. Predicted to be located in endoplasmic reticulum. Is an ortholog of human TMTC4 (transmembrane O-mannosyltransferase targeting cadherins 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F38B6.6
    Corresponding_transcript: F38B6.6.1
    Other_sequence: JI167194.1
      Dviv_isotig31294
      CJC16235_1
      Tcol_isotig15392
      JI167335.1
      JO473687.1
    Associated_feature: WBsf654083
      WBsf670649
      WBsf1005615
      WBsf1005616
      WBsf1005617
      WBsf1023130
      WBsf1023131
      WBsf237511
  Experimental_info: RNAi_result: WBRNAi00014545 Inferred_automatically: RNAi_primary
      WBRNAi00046690 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027673
      Expr1037827
      Expr1150568
      Expr2003470
      Expr2021685
    Drives_construct: WBCnstr00026724
    Construct_product: WBCnstr00026724
    Microarray_results (21)
    Expression_cluster: WBPaper00032976:dosage_compensated_genes
      WBPaper00037950:A-class-motor-neurons_larva_enriched
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:glr-1(+)-neurons_larva_enriched
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00044260:1-methylnicotinamide_downregulated
      WBPaper00044316:CH3HgCl_7.5uM_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:flat_dev_expression
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00046121:ecdoderm_unique
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050496:unc-39(hp701)_regulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050843:sesamin_downregulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056167:Cry5B_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056284:ints-11(RNAi)_downregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058969:RIS_enriched
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059763:neuron_expressed
      WBPaper00060634:fhod-1(tm2363)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AFD
      WBPaper00061340:AIN
      WBPaper00061340:AIN_parent
      WBPaper00061340:ALM_BDU
      WBPaper00061340:ALN
      WBPaper00061340:AVA
      WBPaper00061340:AVB
      WBPaper00061340:AVE
      WBPaper00061340:AVG
      WBPaper00061340:AVK
      WBPaper00061340:AVL
      WBPaper00061340:B
      WBPaper00061340:BAG
      WBPaper00061340:DA
      WBPaper00061340:DB
      WBPaper00061340:DD
      WBPaper00061340:DVC
      WBPaper00061340:FLP
      WBPaper00061340:F_U
      WBPaper00061340:hmc
      WBPaper00061340:M_cell
      WBPaper00061340:Neuroblast_AFD_RMD
      WBPaper00061340:Neuroblast_ALM_BDU
      WBPaper00061340:Neuroblast_AWC_SAAVx
      WBPaper00061340:Parents_of_U_F_B_DVA
      WBPaper00061340:PLM
      WBPaper00061340:PVT
      WBPaper00061340:Rectal_cell
      WBPaper00061340:RIA
      WBPaper00061340:RIB
      WBPaper00061340:RID
      WBPaper00061340:RIH
      WBPaper00061340:RIM
      WBPaper00061340:RIS
      WBPaper00061340:RME
      WBPaper00061340:RMED
      WBPaper00061340:SMB
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:sol-1-jnk-1_18695
      WBPaper00061651:AS_enriched
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_downregulated_N2
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065158:25C_vs_15C_upregulated_AFD
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065841:14_0
      WBPaper00065841:14_1
      WBPaper00065841:14_2
      WBPaper00065841:19_0
      WBPaper00065841:39_3
      WBPaper00065841:68_0
      WBPaper00065841:68_1
      WBPaper00065841:95_0
      WBPaper00065841:96_0
      WBPaper00065841:109_0
      WBPaper00065841:111_0
      WBPaper00065841:118_0
      WBPaper00065841:122_0
      WBPaper00065841:130_0
      WBPaper00065841:132_0
      WBPaper00065841:138_0
      WBPaper00065841:144_0
      WBPaper00065841:145_0
      WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
      WBPaper00066062:xrep-4(lax137)_upregulated
      cgc4386_cluster_3_2
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00030985:Photorhabdus_luminescens_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00034661:AgNPs_downregulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_I
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00042548:miRISC_enriched
      WBPaper00045673:colistin_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(186_min)
      [cgc5767]:expression_class_SE
      [cgc5767]:expression_class_SE_pi(186_min)
    Interaction: WBInteraction000223932
      WBInteraction000246084
      WBInteraction000275382
      WBInteraction000278787
      WBInteraction000333101
      WBInteraction000443340
      WBInteraction000468561
      WBInteraction000468763
      WBInteraction000472683
  Map_info: Positive: Positive_clone: F38B6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -2.56147
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00060275
  Method: Gene