WormBase Tree Display for Gene: WBGene00005153

WBGene00005153 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 2
    Name: CGC_name: srf-3 Person_evidence: WBPerson494
      Sequence_name: M02B1.1
      Molecular_name: M02B1.1a
        M02B1.1a.1
        CE43555
        M02B1.1b
        CE37656
        M02B1.1c
        CE45668
        M02B1.1b.1
        M02B1.1c.1
      Other_name: CELE_M02B1.1 Accession_evidence: NDB BX284604
      Public_name: srf-3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:37 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 28 Jul 2004 10:05:41 WBPerson1971 Event: Acquires_merge: WBGene00010826
      Acquires_merge: WBGene00010826
    Status: Live
  Gene_info (12)
  Disease_info: Experimental_model: DOID:104 Homo sapiens Paper_evidence: WBPaper00006215
          Curator_confirmed: WBPerson324
          Date_last_updated: 07 Nov 2023 00:00:00
    Potential_model: DOID:0070265 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11022)
    Disease_relevance: C. elegans is used as a model system to study bacterial adherence via biofilm formation and to identify genes in the infectious agent as well as the host that are required for infection; elegans srf genes are required for cuticle surface properties like binding to antigens, and for the adherence of bacterial pathogens like Yersinia pseduotuberculosis and Yersinia pestis via biofilms. Homo sapiens Paper_evidence: WBPaper00001706
            WBPaper00026735
            WBPaper00029153
          Curator_confirmed: WBPerson324
          Date_last_updated: 06 Mar 2013 00:00:00
  Models_disease_in_annotation: WBDOannot00000015
  Molecular_info: Corresponding_CDS: M02B1.1a
      M02B1.1b
      M02B1.1c
    Corresponding_CDS_history: M02B1.1:wp109
      M02B1.1:wp133
      M02B1.1:wp201
    Corresponding_transcript: M02B1.1a.1
      M02B1.1b.1
      M02B1.1c.1
    Other_sequence: CRC11400_1
      FC815126.1
      PPC11536_1
      JI467852.1
      CR05429
      SRC00576_1
      JO472062.1
      SR01573
      Name_isotig07744
      JI171965.1
    Associated_feature: WBsf646492
      WBsf659850
      WBsf998259
      WBsf1018447
      WBsf229337
  Experimental_info: RNAi_result: WBRNAi00050803 Inferred_automatically: RNAi_primary
      WBRNAi00062589 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3026
      Expr1013846
      Expr1032513
      Expr1154495
      Expr2016312
      Expr2034539
    Drives_construct: WBCnstr00011081
    Construct_product: WBCnstr00011081
    Microarray_results: SMD_M02B1.1
      191963_at
      A_12_P119656
      Aff_M02B1.1
      GPL13394_WBGene00005153
      GPL13914_M02B1.1
      GPL14144_M02B1.1_702-761_0.930_4_C
      GPL14144_M02B1.1_769-828_0.936_2_B
      GPL14144_M02B1.1_890-949_0.940_1_A
      GPL19516_CGZ0029725
      GPL19516_CGZ0029726
      GPL19516_CGZ0029727
      GPL21109_M02B1.1a
      GPL3518_CE12312
      GPL8304_CE_WBGene00005153_A
      GPL8304_CE_WBGene00005153_B
      GPL8673_M02B1_1P00180
      GPL8673_M02B1_1P00356
      GPL8673_M02B1_1P00911
    Expression_cluster (86)
    Interaction: WBInteraction000008513
      WBInteraction000008514
      WBInteraction000008515
      WBInteraction000008516
      WBInteraction000052148
      WBInteraction000052751
      WBInteraction000326994
      WBInteraction000425692
    WBProcess: WBbiopr:00000008
      WBbiopr:00000039
  Map_info: Map: IV Position: 6.37339 Error: 0.00679
    Positive: Positive_clone: M02B1 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 4986
        4987
      Multi_point: 1750
        1751
        2656
        4484
      Pos_neg_data: 4985
        7207
  Reference: WBPaper00001280
    WBPaper00001480
    WBPaper00001493
    WBPaper00001500
    WBPaper00001576
    WBPaper00001706
    WBPaper00004539
    WBPaper00006215
    WBPaper00010374
    WBPaper00011638
    WBPaper00013879
    WBPaper00014156
    WBPaper00014307
    WBPaper00015813
    WBPaper00017907
    WBPaper00018224
    WBPaper00018227
    WBPaper00019024
    WBPaper00019027
    WBPaper00019613
    WBPaper00020960
    WBPaper00023230
    WBPaper00024246
    WBPaper00024880
    WBPaper00025180
    WBPaper00025635
    WBPaper00026683
    WBPaper00026725
    WBPaper00026735
    WBPaper00027264
    WBPaper00028332
    WBPaper00028877
    WBPaper00029024
    WBPaper00029153
    WBPaper00029307
    WBPaper00030855
    WBPaper00031925
    WBPaper00033289
    WBPaper00037686
    WBPaper00038491
    WBPaper00052048
    WBPaper00052104
    WBPaper00053657
    WBPaper00055090
    WBPaper00057025
    WBPaper00061466
    WBPaper00061786
    WBPaper00065080
    WBPaper00065106
    WBPaper00065859
  Method: Gene