WormBase Tree Display for Gene: WBGene00097130

WBGene00097130 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 2
    Name: CGC_name: Ppa-dhp-2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA07576
      Molecular_name: PPA07576
        PPA07576.1
        PP64691
      Other_name: GENEPREDICTION_SNAP300000064051
        UMS-S233-15.53 Person_evidence: WBPerson606
      Public_name: Ppa-dhp-2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-dhp-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhp
    RNASeq_FPKM: WBls:0000032 2.12144 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.707147 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00176805
      00176806
      00176807
    Ortholog: WBGene00000964 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00026309 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065614 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00073676 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00151560 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00126622 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00156717 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00159283 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00194750 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00040591 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00000963 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00119510 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00182486 Caenorhabditis japonica From_analysis: WormBase-Compara
      CBOVI.g10418 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g8593 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2027 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14379 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g19332 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g7478 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g7481 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13054 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g2599 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10734 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g22138 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g104 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g13672 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15436 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g17194 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g10928 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g18350 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g2220 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13049 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g4869 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00022.g1365 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_03957.g18504 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g1754 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g14360 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold585.g4826 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9972 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01076.g18187 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_02936.g28455 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10386 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20949 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000187 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_014410 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08666 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g6911 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40254100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00071327 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrIV_pilon.g11463 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrI_pilon.g1343 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266967 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287291 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00097129 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds. Predicted to be located in cytoplasm. Is an ortholog of C. elegans dhp-2. In C. elegans, dhp-2 is involved in pyrimidine nucleobase catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA07576
    Corresponding_transcript: PPA07576.1
    Other_sequence: Dviv_isotig13548
      PP02445
      BG468043.1
      EX547601.1
      SS02787
      MI03556
      Acan_isotig11544
      MP00359
      Oden_isotig13620
      MC02179
      EX011856.1
      ACC05422_1
      EX538239.1
      EX537376.1
      Oden_isotig13619
      EX537834.1
      EX547098.1
      EX547882.1
      MAC01719_1
      AYC00007_1
      CJC00510_1
      EX547443.1
      PTC00694_1
      CJC12685_1
      PPC02721_1
      EX549144.1
      MI03555
      MIC00094_1
      PT01704
      PVC00435_1
      MCC03033_1
      AYC02935_1
      Tcol_isotig10323
      NAC00674_1
      HBC26612_1
      CV199423.1
      JI223313.1
      MA02486
      EX548620.1
      EX546525.1
      Tcol_isotig14271
      AE00193
      EX543388.1
      CN478231.1
      EX542848.1
      CR01417
      Dviv_isotig34216
      EX550190.1
      CRC06911_1
      EX543028.1
      AE00695
      MPC01710_1
      CJC14837_1
  Experimental_info: Microarray_results: GPL14372_Probes_80203
      GPL14372_Probes_80204
      GPL14372_Probes_80207
      GPL14372_Probes_80208
      GPL14372_Probes_80209
  Method: Gene