Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00000088

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00000088EvidenceCGC_data_submission
SMapS_parentSequenceF32A7
IdentityVersion1
NameCGC_nameaex-5Person_evidenceWBPerson655
Sequence_nameF32A7.6
Molecular_nameF32A7.6
F32A7.6.1
CE28554
Other_namekpc-3
kpc-5
CELE_F32A7.6Accession_evidenceNDBBX284601
Public_nameaex-5
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaex
Allele (170)
Legacy_information[Jim Thomas] Defecation defective, moderate to severe constipation, expulsion muscle contraction (Exp) missing in about 9 of 10 defecation cycles, anterior body contraction (aBoc) usually missing as well, adult males unaffected and mate well.
See also sa23, sa41, sa42, sa43
[C.elegansII] sa23 : defecation defective, moderate to severe constipation, expulsion muscle contraction (Exp) missing in about 9 of 10 defecation cycles, anterior body contraction (aBoc) usually missing as well, adult males unaffected and mate well. OA3: sa41, sa42, sa43 (all similar) [Thomas 1990; JT]
StrainWBStrain00022773
RNASeq_FPKM (74)
GO_annotation (29)
OrthologWBGene00060890Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00038888Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00155888Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00123364Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00154502Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00149997Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00136111Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00121280Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00071303Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064328Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00193771Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194468Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00228121Brugia malayiFrom_analysisWormBase-Compara
WBGene00233246Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9401Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1030Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g19938Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g7268Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8241Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4260Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22273Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9280Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14409Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15779Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7048Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9436Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g9438Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00825.g14407Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-aex-5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g3788Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold572.g4322Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold572.g4324Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01801.g23225Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_23695Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001452Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05967Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g19569Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23307Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23308Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10010700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2980Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00214263Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00237032Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238730Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00304990Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00260460Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260461Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00001172Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000254Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00002232Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017686Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionan ortholog of calcium-dependent serine endoproteinases, the kex2/subtilisin-like proprotein convertase that affects defecation cycle and anterior body contractions; and is expressed in all muscle cells except pharyngeal muscles.Paper_evidenceWBPaper00004142
Curator_confirmedWBPerson480
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnables serine-type endopeptidase activity. Involved in several processes, including neuropeptide processing; positive regulation of synaptic assembly at neuromuscular junction; and positive regulation of transport. Located in extracellular space.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_info (5)
Experimental_infoRNAi_result (36)
Expr_patternExpr1010377
Expr1149978
Expr2009250
Expr2027487
Drives_constructWBCnstr00037741
Construct_productWBCnstr00005315
WBCnstr00007723
WBCnstr00037741
Microarray_results (19)
Expression_cluster (145)
InteractionWBInteraction000001570
WBInteraction000028975
WBInteraction000165455
WBInteraction000519683
WBInteraction000524187
WBInteraction000557476
WBInteraction000557477
WBInteraction000557478
WBProcessWBbiopr:00000010
Map_infoMapIPosition27.9582Error0.002256
Well_ordered
PositivePositive_cloneF32A7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point1479
1697
Pos_neg_data4754
4755
4756
4757
4758
4759
4760
Reference (34)
RemarkSequence connection from [Thacker C]
old_name kpc-5 becomes new_name aex-5 from [Thacker C].
MethodGene