WormBase Tree Display for Gene: WBGene00000618

WBGene00000618 SMap: S_parent: Sequence: T10B10
  Identity: Version: 1
    Name: CGC_name: col-41 Person_evidence: WBPerson345
      Sequence_name: T10B10.1
      Molecular_name: T10B10.1
        T10B10.1.1
        CE06399
      Other_name: CELE_T10B10.1 Accession_evidence: NDB BX284606
      Public_name: col-41
    DB_info: Database: AceView gene XP794
        WormQTL gene WBGene00000618
        WormFlux gene WBGene00000618
        NDB locus_tag CELE_T10B10.1
        Panther gene CAEEL|WormBase=WBGene00000618|UniProtKB=Q22369
          family PTHR24637
        NCBI gene 181610
        RefSeq protein NM_078121.5
        TREEFAM TREEFAM_ID TF319043
        TrEMBL UniProtAcc Q22369
        UniProt_GCRP UniProtAcc Q22369
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (32)
    RNASeq_FPKM (74)
    GO_annotation: 00075098
      00075099
      00107627
    Ortholog: WBGene00058614 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029604 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00143853 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00124332 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00090882 Pristionchus pacificus From_analysis: OMA
      WBGene00228353 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g13882 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13307 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23151 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24943 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9709 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5425 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9022 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8815 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00170.g6124 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_17411.g25682 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-col-41 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold558.g3800 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00529.g12486 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_025576 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g5584 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0136800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20714 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237999 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00273189 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278323 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00288383 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-030131-3430 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-110411-119 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      MGI:88445 Mus musculus From_analysis: EnsEMBL-Compara
            SonicParanoid
      MGI:88447 Mus musculus From_analysis: EnsEMBL-Compara
            SonicParanoid
      MGI:88466 Mus musculus From_analysis: EnsEMBL-Compara
            SonicParanoid
      MGI:1916950 Mus musculus From_analysis: EnsEMBL-Compara
            SonicParanoid
      MGI:1924268 Mus musculus From_analysis: EnsEMBL-Compara
            SonicParanoid
      MGI:1095396 Mus musculus From_analysis: EnsEMBL-Compara
            SonicParanoid
    Paralog (165)
    Structured_description: Concise_description: col-41 encodes a cuticle collagen. Curator_confirmed: WBPerson1843
          Date_last_updated: 03 Apr 2007 00:00:00
      Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Expressed in hypodermis and vulval precursor cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T10B10.1
    Corresponding_transcript: T10B10.1.1
    Other_sequence (31)
    Associated_feature: WBsf980898
      WBsf980899
      WBsf980900
      WBsf980901
      WBsf238302
      WBsf238303
  Experimental_info (7)
  Map_info: Map: X Position: 22.2634
    Positive: Positive_clone: T10B10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (13)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene