WormBase Tree Display for Gene: WBGene00102744

WBGene00102744 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 6
    Name: CGC_name: Ppa-cya-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA13190
      Molecular_name: PPA13190
        PPA13190.1
        PP04013
      Other_name: GENEPREDICTION_SNAP300000069671
        UMS-S413-3.89 Person_evidence: WBPerson606
      Public_name: Ppa-cya-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 01 May 2012 15:56:21 WBPerson2970 Name_change: CGC_name: Ppa-cya-1
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Ppa-cya-1
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-cya-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cya
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 10.393 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        31.1791 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Ortholog: WBGene00000863 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00000866 Caenorhabditis elegans From_analysis: OMA
      WBGene00000867 Caenorhabditis elegans From_analysis: OMA
      WBGene00029121 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00055167 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00065754 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00065755 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00066702 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00148017 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00154960 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00152961 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00119238 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00227740 Brugia malayi From_analysis: WormBase-Compara
      WBGene00000864 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017259 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00246337 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g5801 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7003 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18064 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g125 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g20129 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22739 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g3348 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g16109 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6264 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g2046 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6406 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9096 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00132.g5212 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cya-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9754 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01713.g22681 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05680 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_06148 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_06149 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_07489 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009356 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_020959 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_020961 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03705 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_30259700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00079098 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrIII_pilon.g6694 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrIII_pilon.g8547 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrII_pilon.g3555 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrX_pilon.g19572 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrX_pilon.g20794 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00289041 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00099191 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115822 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00275558 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00275690 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277522 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278456 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281159 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281292 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00306075 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Cyclin, C-terminal domain; Cyclin; Cyclin-like superfamily; Cyclin, N-terminal; Cyclin, N-terminal domain; and Cyclin-like. Is an ortholog of C. elegans cya-1. In C. elegans, cya-1 is involved in meiotic cell cycle. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA13190
    Corresponding_transcript: PPA13190.1
    Other_sequence: HC01126
      PPC01177_1
      PPC00016_1
      Tcir_isotig16843
      HCC11241_1
      PPC04784_1
      PP00172
      PP01322
  Experimental_info: Microarray_results: GPL14372_Probes_54000
      GPL14372_Probes_54001
      GPL14372_Probes_54002
      GPL14372_Probes_54003
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190208 pad] The CGC name Ppa-cya-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-cya-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene