WormBase Tree Display for Gene: WBGene00148508

WBGene00148508 SMap: S_parent: Sequence: Cbre_Contig57
  Identity (5)
  Gene_info: Biotype: SO:0001217
    Gene_class: sorb
    RNASeq_FPKM: WBls:0000002 0.275661 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0.421245 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.544442 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.665484 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.667639 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        0.78865 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.895656 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        0.925961 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.68003 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 1.06271 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        2.12542 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 12.1607 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        16.6921 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        17.0708 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        18.1354 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        19.4487 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 7.65243 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        8.1639 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        8.67537 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (16)
      WBls:0000101 1.40556 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        2.28729 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog: WBGene00012891 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00072564 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00080331 Caenorhabditis remanei From_analysis: Inparanoid_8
      CBOVI.g10777 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14958 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6075 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7465 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP31.g9656 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g10094 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5908 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21302 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g7783 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00130.g5167 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g12707 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g16375 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01504.g21322 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_013155 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02830 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g23208 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40268500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00040942 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00072565 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072784 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072786 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075990 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00076857 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00113724 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00226832 Brugia malayi From_analysis: WormBase-Compara
      chrIV_pilon.g12372 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241390 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00267341 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00297715 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301337 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00190078 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00139053 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00141216 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00149939 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00158063 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00163512 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: SH3-like domain superfamily; SH3 domain; Vinexin; SoHo domain; and Variant SH3 domain. Is an ortholog of C. elegans sorb-1. In C. elegans, sorb-1 is involved in maintenance of mitochondrion location and sarcomere organization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN09783
    Corresponding_transcript: CBN09783.1
    Other_sequence (13)
  Experimental_info: Microarray_results: GPL14142_CBN09783_1088-1147_0.788_137_A
  Method: Gene