WormBase Tree Display for Gene: WBGene00163241

WBGene00163241 SMap: S_parent: Sequence: Cbre_Contig156
  Identity: Version: 2
    Name: CGC_name: Cbn-xpf-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN24516
      Molecular_name: CBN24516
        CBN24516.1
        CN12597
      Public_name: Cbn-xpf-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-xpf-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: xpf
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        4.39532 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        8.79063 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 10.4819 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        12.4912 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        7.24537 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        9.22249 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        9.32251 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 6.41156 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        8.01023 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        9.60891 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 4.74431 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        6.12031 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog: WBGene00008140 Caenorhabditis elegans From_analysis: Inparanoid_8
      WBGene00026063 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00053331 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g6345 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g6348 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g6352 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7395 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4620 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17040 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20266 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16867 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9437 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5411 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g23759 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22429 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00800.g14214 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-xpf-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold458.g1424 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02192.g25340 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_005574 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02589 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3105 Panagrellus redivivus From_analysis: WormBase-Compara
      WBGene00107973 Pristionchus pacificus From_analysis: WormBase-Compara
      chrII_pilon.g6012 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00257245 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291374 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00148308 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00150486 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00159444 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is an ortholog of C. elegans xpf-1. In C. elegans, xpf-1 is involved in DNA damage response; meiotic nuclear division; and regulation of multicellular organismal development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN24516
    Corresponding_transcript: CBN24516.1
    Other_sequence: CBC04779_1
      MIC06355_1
  Experimental_info: Microarray_results: GPL14142_CBN09583_697-756_0.888_35_C
      GPL14142_CBN09583_798-857_0.897_28_B
  Method: Gene