WormBase Tree Display for Gene: WBGene00304687

WBGene00304687 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 4
    Name: CGC_name: Ppa-gdh-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA46908
      Molecular_name: PPA46908
        PPA46908.1
        PP18922
        PPA46908.2
      Public_name: Ppa-gdh-1
    Species: Pristionchus pacificus
    History: Version_change: 1 21 Feb 2019 14:49:04 WBPerson4055 Event: Created
        2 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Ppa-gdh-1
        3 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        4 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-gdh-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gdh
    RNASeq_FPKM: WBls:0000032 51.7454 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 28.2138 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        32.8961 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00303005
      00303006
      00303007
    Ortholog: WBGene00140532 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00147029 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00028507 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00227819 Brugia malayi From_analysis: WormBase-Compara
      WBGene00014095 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00131715 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00240546 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g11651 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12742 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13470 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10991 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7686 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6477 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10118 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4477 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g14355 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17595 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00688.g13446 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00803.g14241 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_18930.g26100 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-gdh-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15590 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00015.g985 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04888 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014208 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13696 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15535 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40234610 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00066332 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00074274 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00263574 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00266528 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292285 Trichuris muris From_analysis: WormBase-Compara
      WBGene00292286 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296389 Trichuris muris From_analysis: WormBase-Compara
      WBGene00302364 Trichuris muris From_analysis: WormBase-Compara
      WBGene00302819 Trichuris muris From_analysis: WormBase-Compara
      chrIV_pilon.g11970 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor. Predicted to be involved in amino acid metabolic process. Is an ortholog of C. elegans gdh-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA46908
    Corresponding_CDS_history: PPA46908:pp275
    Corresponding_transcript: PPA46908.1
      PPA46908.2
    Other_sequence (391)
  Experimental_info: Microarray_results: GPL14372_Probes_76526
      GPL14372_Probes_76527
      GPL14372_Probes_76529
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_S.marcescens_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [210528 pad] The CGC name Ppa-gdh-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene