WormBase Tree Display for Gene: WBGene00103392

WBGene00103392 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 6
    Name: CGC_name: Ppa-prpf-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA13838
      Molecular_name: PPA13838
        PPA13838.1
        PP63346
      Other_name: GENEPREDICTION_SNAP300000070340
        UMA-S2866-2.51 Person_evidence: WBPerson606
      Public_name: Ppa-prpf-4
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 18 Nov 2010 11:54:45 WBPerson2970 Name_change: CGC_name: Ppa-prpf-4
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:22 WBPerson1983 Name_change: CGC_name: Ppa-prpf-4
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Ppa-prpf-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: prpf
    RNASeq_FPKM: WBls:0000032 22.4102 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 16.2923 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        22.4102 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        26.4666 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00179379
      00179380
      00179381
    Ortholog (69)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans prpf-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA13838
    Corresponding_transcript: PPA13838.1
    Other_sequence: FG979787.1
      JI163848.1
      GR12468
      PPC02178_1
      PP02102
      Dviv_isotig11741
      PPC18795_1
      HG03671
      MC01723
      JO468494.1
      PP01694
      GT737340.1
      HSC00427_1
      EY471616.1
      FC554240.1
      FC553275.1
      FC544537.1
      Dviv_isotig11742
      MHC02605_1
      JI166041.1
      Dviv_isotig11739
      PPC02598_1
      Dviv_isotig11740
      MCC00429_1
      Hbac_isotig01878
      HGC10368_1
      FG979587.1
      RS06596
      EY466496.1
      PP02437
      RS06597
      Oden_isotig18878
      CBC01454_1
      HG03546
      GW915781.1
      MH06103
      EX535658.1
      HGC02451_1
      HBC01333_1
      GW915820.1
      Acan_isotig06210
      GRC01383_1
      PPC08386_1
      EY460476.1
      JI174851.1
      FC550720.1
      JI164140.1
      FG980135.1
      FC540801.1
      HS00387
      ES739272.1
      JI163855.1
      FG977151.1
      Dviv_isotig21856
      FC548994.1
      EY469724.1
      JI165251.1
      HG00928
      PPC02707_1
      EY458267.1
      Hbac_isotig05258
      GO252717.1
      ACC12643_1
  Experimental_info: Microarray_results: GPL14372_Probes_50558
      GPL14372_Probes_50559
      GPL14372_Probes_50560
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Remark: [190208 pad] The CGC name Ppa-prpf-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-prpf-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene