Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00103392

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00103392SMapS_parentSequencePPA_ChrV
IdentityVersion6
NameCGC_namePpa-prpf-4From_analysisInferred_from_orthology
Sequence_namePPA13838
Molecular_namePPA13838
PPA13838.1
PP63346
Other_nameGENEPREDICTION_SNAP300000070340
UMA-S2866-2.51Person_evidenceWBPerson606
Public_namePpa-prpf-4
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
218 Nov 2010 11:54:45WBPerson2970Name_changeCGC_namePpa-prpf-4
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:22WBPerson1983Name_changeCGC_namePpa-prpf-4
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:27WBPerson1983Name_changeCGC_namePpa-prpf-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classprpf
RNASeq_FPKMWBls:000003222.4102From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.2923From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
22.4102From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
26.4666From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00179379
00179380
00179381
OrthologWBGene00140014Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160819Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00039451Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223780Brugia malayiFrom_analysisWormBase-Compara
WBGene00004186Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00132150Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216770Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00236941Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g2950Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2951Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2952Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g9634Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10611Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9535Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15031Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13058Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10730Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g106Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g12710Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g14324Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g1523Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g1580Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16355Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16360Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16365Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16367Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16368Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16370Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16371Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g20741Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g21262Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g22137Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g23426Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g23427Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g24461Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g24481Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g25299Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g27556Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g545Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6818Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6827Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6842Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g7019Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g7021Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8111Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g9132Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g9169Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15432Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10319Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g1750Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18347Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19207Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00152.g5734Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-prpf-4Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9949Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00933.g16884Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07579Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000252Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01533Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02713Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05513Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09471Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11780Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g12568Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10082400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00072279Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrI_pilon.g1306Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262574Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287721Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00090868Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092113Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096249Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096549Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106110Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106759Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108523Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112362Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114520Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272465Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274434Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304836Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304837Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans prpf-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA13838
Corresponding_transcriptPPA13838.1
Other_sequenceFG979787.1
JI163848.1
GR12468
PPC02178_1
PP02102
Dviv_isotig11741
PPC18795_1
HG03671
MC01723
JO468494.1
PP01694
GT737340.1
HSC00427_1
EY471616.1
FC554240.1
FC553275.1
FC544537.1
Dviv_isotig11742
MHC02605_1
JI166041.1
Dviv_isotig11739
PPC02598_1
Dviv_isotig11740
MCC00429_1
Hbac_isotig01878
HGC10368_1
FG979587.1
RS06596
EY466496.1
PP02437
RS06597
Oden_isotig18878
CBC01454_1
HG03546
GW915781.1
MH06103
EX535658.1
HGC02451_1
HBC01333_1
GW915820.1
Acan_isotig06210
GRC01383_1
PPC08386_1
EY460476.1
JI174851.1
FC550720.1
JI164140.1
FG980135.1
FC540801.1
HS00387
ES739272.1
JI163855.1
FG977151.1
Dviv_isotig21856
FC548994.1
EY469724.1
JI165251.1
HG00928
PPC02707_1
EY458267.1
Hbac_isotig05258
GO252717.1
ACC12643_1
Experimental_infoMicroarray_resultsGPL14372_Probes_50558
GPL14372_Probes_50559
GPL14372_Probes_50560
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
Remark[190208 pad] The CGC name Ppa-prpf-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-prpf-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene