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WormBase Tree Display for Gene: WBGene00003409

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Name Class

WBGene00003409SMapS_parentSequenceE03G2
IdentityVersion1
NameCGC_namemrp-3Person_evidenceWBPerson490
Sequence_nameE03G2.2
Molecular_nameE03G2.2
E03G2.2.1
CE53290
Other_nameCELE_E03G2.2Accession_evidenceNDBBX284606
Public_namemrp-3
DB_infoDatabaseAceViewgeneXQ550
WormQTLgeneWBGene00003409
WormFluxgeneWBGene00003409
NDBlocus_tagCELE_E03G2.2
PanthergeneCAEEL|WormBase=WBGene00003409|UniProtKB=Q19048
familyPTHR24223
NCBIgene181677
RefSeqproteinNM_001373606.4
TREEFAMTREEFAM_IDTF105199
TrEMBLUniProtAccQ19048
UniProt_GCRPUniProtAccQ19048
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:31WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmrp
Allele (144)
StrainWBStrain00031736
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (45)
ParalogWBGene00000477Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003407Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003408Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003411Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003410Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003414Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003413Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003412Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSE03G2.2
Corresponding_CDS_historyE03G2.2:wp173
E03G2.2:wp271
Corresponding_transcriptE03G2.2.1
Other_sequence (43)
Associated_featureWBsf671406
WBsf671407
WBsf1008381
WBsf1008382
WBsf238364
Experimental_infoRNAi_resultWBRNAi00012666Inferred_automaticallyRNAi_primary
WBRNAi00001565Inferred_automaticallyRNAi_primary
WBRNAi00070107Inferred_automaticallyRNAi_primary
WBRNAi00043636Inferred_automaticallyRNAi_primary
Expr_patternExpr1021072
Expr1031578
Expr1147622
Expr2013688
Expr2031923
Drives_constructWBCnstr00036133
Construct_productWBCnstr00036133
Microarray_results (18)
Expression_cluster (159)
Interaction (25)
Map_infoMapXPosition22.9657Error0.006476
PositivePositive_cloneE03G2Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5265
Pseudo_map_position
ReferenceWBPaper00002619
WBPaper00027644
WBPaper00031484
WBPaper00038491
WBPaper00048852
WBPaper00055090
WBPaper00062515
WBPaper00064023
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene