WormBase Tree Display for Gene: WBGene00003409
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WBGene00003409 | SMap | S_parent | Sequence | E03G2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | mrp-3 | Person_evidence | WBPerson490 | |||||
Sequence_name | E03G2.2 | ||||||||
Molecular_name | E03G2.2 | ||||||||
E03G2.2.1 | |||||||||
CE53290 | |||||||||
Other_name | CELE_E03G2.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | mrp-3 | ||||||||
DB_info | Database | AceView | gene | XQ550 | |||||
WormQTL | gene | WBGene00003409 | |||||||
WormFlux | gene | WBGene00003409 | |||||||
NDB | locus_tag | CELE_E03G2.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003409|UniProtKB=Q19048 | |||||||
family | PTHR24223 | ||||||||
NCBI | gene | 181677 | |||||||
RefSeq | protein | NM_001373606.4 | |||||||
TREEFAM | TREEFAM_ID | TF105199 | |||||||
TrEMBL | UniProtAcc | Q19048 | |||||||
UniProt_GCRP | UniProtAcc | Q19048 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mrp | ||||||||
Allele (144) | |||||||||
Strain | WBStrain00031736 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (45) | |||||||||
Paralog | WBGene00000477 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00003407 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003408 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003411 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003410 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003414 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003413 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003412 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | E03G2.2 | |||||||
Corresponding_CDS_history | E03G2.2:wp173 | ||||||||
E03G2.2:wp271 | |||||||||
Corresponding_transcript | E03G2.2.1 | ||||||||
Other_sequence (43) | |||||||||
Associated_feature | WBsf671406 | ||||||||
WBsf671407 | |||||||||
WBsf1008381 | |||||||||
WBsf1008382 | |||||||||
WBsf238364 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012666 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001565 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070107 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043636 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021072 | ||||||||
Expr1031578 | |||||||||
Expr1147622 | |||||||||
Expr2013688 | |||||||||
Expr2031923 | |||||||||
Drives_construct | WBCnstr00036133 | ||||||||
Construct_product | WBCnstr00036133 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (159) | |||||||||
Interaction (25) | |||||||||
Map_info | Map | X | Position | 22.9657 | Error | 0.006476 | |||
Positive | Positive_clone | E03G2 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5265 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00002619 | ||||||||
WBPaper00027644 | |||||||||
WBPaper00031484 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00048852 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00062515 | |||||||||
WBPaper00064023 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |