WormBase Tree Display for Gene: WBGene00006983
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| WBGene00006983 | SMap | S_parent | Sequence | T03G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | zig-6 | Person_evidence | WBPerson260 | |||||
| Sequence_name | T03G11.8 | ||||||||
| Molecular_name | T03G11.8 | ||||||||
| T03G11.8.1 | |||||||||
| CE40660 | |||||||||
| Other_name | CELE_T03G11.8 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | zig-6 | ||||||||
| DB_info | Database | AceView | gene | XF804 | |||||
| WormQTL | gene | WBGene00006983 | |||||||
| WormFlux | gene | WBGene00006983 | |||||||
| NDB | locus_tag | CELE_T03G11.8 | |||||||
| NCBI | gene | 192089 | |||||||
| RefSeq | protein | NM_076481.8 | |||||||
| SwissProt | UniProtAcc | Q22125 | |||||||
| UniProt_GCRP | UniProtAcc | Q22125 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:44 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | zig | ||||||||
| Allele (38) | |||||||||
| Strain | WBStrain00031589 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00074240 | ||||||||
| 00074241 | |||||||||
| 00074242 | |||||||||
| 00074243 | |||||||||
| 00074244 | |||||||||
| 00074245 | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00004370 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00006978 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006979 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006980 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006981 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021305 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017184 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006984 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | zig-6 encodes a predicted secreted protein that is a member of the immunoglobulin superfamily of proteins; loss of zig-6 activity in large-scale RNAi screens results in a Clear phenotype; a zig-6::gfp reporter fusion is expressed in anterior and posterior body wall muscle. | Paper_evidence | WBPaper00005064 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 14 Jan 2008 00:00:00 | ||||||||
| Automated_description | Involved in homeostatic process. Predicted to be located in neuron projection membrane. Expressed in body wall musculature; enteric muscle; head neurons; and vulval muscle. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T03G11.8 | |||||||
| Corresponding_CDS_history | T03G11.8:wp154 | ||||||||
| T03G11.8:wp169 | |||||||||
| Corresponding_transcript | T03G11.8.1 | ||||||||
| Other_sequence | Tcol_isotig11591 | ||||||||
| ES410354.1 | |||||||||
| Acan_isotig11114 | |||||||||
| CJC05405_1 | |||||||||
| HBC00872_1 | |||||||||
| Oden_isotig20806 | |||||||||
| Tcol_isotig11592 | |||||||||
| Associated_feature | WBsf653963 | ||||||||
| WBsf653964 | |||||||||
| WBsf670514 | |||||||||
| WBsf717330 | |||||||||
| WBsf237360 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009105 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052307 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1752 | ||||||||
| Expr4920 | |||||||||
| Expr1010693 | |||||||||
| Expr1155942 | |||||||||
| Expr2018145 | |||||||||
| Expr2036282 | |||||||||
| Drives_construct | WBCnstr00001467 | ||||||||
| WBCnstr00012333 | |||||||||
| WBCnstr00034052 | |||||||||
| Construct_product | WBCnstr00034052 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction | WBInteraction000212636 | ||||||||
| WBInteraction000251200 | |||||||||
| WBInteraction000258316 | |||||||||
| WBInteraction000331685 | |||||||||
| WBInteraction000391276 | |||||||||
| WBInteraction000417653 | |||||||||
| WBInteraction000441099 | |||||||||
| WBInteraction000458673 | |||||||||
| WBInteraction000503241 | |||||||||
| Map_info | Map | X | Position | -6.0574 | Error | 0.045698 | |||
| Positive | Positive_clone | T03G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4502 | |||||||
| 4767 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003949 | ||||||||
| WBPaper00005064 | |||||||||
| WBPaper00019643 | |||||||||
| WBPaper00024192 | |||||||||
| WBPaper00024193 | |||||||||
| WBPaper00030736 | |||||||||
| WBPaper00031003 | |||||||||
| WBPaper00032446 | |||||||||
| WBPaper00035166 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
