WormBase Tree Display for Gene: WBGene00007912
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| WBGene00007912 | SMap | S_parent | Sequence | C34B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | figo-1 | Person_evidence | WBPerson242 | |||||
| Sequence_name | C34B7.2 | ||||||||
| Molecular_name | C34B7.2 | ||||||||
| C34B7.2.1 | |||||||||
| CE32316 | |||||||||
| Other_name | CELE_C34B7.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | figo-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Aug 2019 15:19:40 | WBPerson1983 | Name_change | CGC_name | figo-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | figo | ||||||||
| Allele (48) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00049009 | ||||||||
| 00049010 | |||||||||
| 00049011 | |||||||||
| 00049012 | |||||||||
| 00049013 | |||||||||
| 00049014 | |||||||||
| 00115895 | |||||||||
| 00115896 | |||||||||
| 00115897 | |||||||||
| Contained_in_operon | CEOP1464 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00006763 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00007620 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009264 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012016 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012353 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00086546 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Predicted to be located in intracellular membrane-bounded organelle. Expressed in GABAergic neurons; body wall musculature; head neurons; intestine; and tail neurons. Human ortholog(s) of this gene implicated in several diseases, including Charcot-Marie-Tooth disease type 4J; Yunis-Varon syndrome; and amyotrophic lateral sclerosis type 11. Is an ortholog of human FIG4 (FIG4 phosphoinositide 5-phosphatase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110184 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16873) | ||||
| DOID:0060589 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16873) | ||||||
| DOID:0080923 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16873) | ||||||
| DOID:0060202 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16873) | ||||||
| Molecular_info | Corresponding_CDS | C34B7.2 | |||||||
| Corresponding_CDS_history | C34B7.2:wp90 | ||||||||
| Corresponding_transcript | C34B7.2.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf218148 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00060743 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00116906 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060744 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041836 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029503 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003078 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060742 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060745 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076191 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3534 | ||||||||
| Expr3554 | |||||||||
| Expr1023821 | |||||||||
| Expr1033427 | |||||||||
| Expr1145854 | |||||||||
| Expr2001377 | |||||||||
| Expr2019601 | |||||||||
| Drives_construct | WBCnstr00011458 | ||||||||
| WBCnstr00033387 | |||||||||
| Construct_product | WBCnstr00011478 | ||||||||
| WBCnstr00033387 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | I | Position | 2.74929 | |||||
| Positive | Positive_clone | C34B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034075 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
