WormBase Tree Display for Gene: WBGene00012259
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| WBGene00012259 | SMap | S_parent | Sequence | W04G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | sulp-7 | Person_evidence | WBPerson2233 | |||||
| Sequence_name | W04G3.6 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_W04G3.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | sulp-7 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00012259 | |||||
| WormFlux | gene | WBGene00012259 | |||||||
| NDB | locus_tag | CELE_W04G3.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012259|UniProtKB=G5EC30 | |||||||
| family | PTHR11814 | ||||||||
| NCBI | gene | 189195 | |||||||
| RefSeq | protein | NM_001038479.2 | |||||||
| NM_001038482.4 | |||||||||
| NM_001038481.4 | |||||||||
| NM_001038480.2 | |||||||||
| TrEMBL | UniProtAcc | G5EFX9 | |||||||
| G5EGG6 | |||||||||
| G5EC30 | |||||||||
| G5EE27 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EC30 | |||||||
| OMIM | gene | 126650 | |||||||
| 604943 | |||||||||
| 605646 | |||||||||
| 606718 | |||||||||
| 610130 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Oct 2004 18:04:32 | WBPerson1846 | Event | Acquires_merge | WBGene00012262 | ||||
| 3 | 19 Jan 2005 16:30:54 | WBPerson2970 | Name_change | CGC_name | sulp-7 | ||||
| Acquires_merge | WBGene00012262 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sulp | ||||||||
| Allele (93) | |||||||||
| Strain | WBStrain00037626 | ||||||||
| WBStrain00037645 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00010788 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010789 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013963 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018283 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020914 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016945 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017464 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | sulp-7 encodes one of eight C. elegans members of the sulfate permease family of anion transporters; by homology, SULP-7 is predicted to function as an anion transporter that regulates cellular pH and volume via transmembrane movement of electrolytes and fluids; a sulp-7::GFP transcriptional fusion is widely expressed in body wall, pharyngeal, and vulval muscles, head and body hypodermal cells, and the intestine. | Paper_evidence | WBPaper00025075 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 13 Sep 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable salt transmembrane transporter activity. Predicted to be involved in inorganic anion transmembrane transport and organic anion transport. Predicted to be located in membrane. Expressed in body wall musculature; hypodermis; intestine; pharyngeal muscle cell; and vulval muscle. Human ortholog(s) of this gene implicated in several diseases, including Pendred Syndrome; autosomal recessive nonsyndromic deafness (multiple); and bone disease (multiple). Is an ortholog of several human genes including SLC26A2 (solute carrier family 26 member 2); SLC26A3 (solute carrier family 26 member 3); and SLC26A4 (solute carrier family 26 member 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (15) | ||||||||
| Molecular_info | Corresponding_CDS | W04G3.6a | |||||||
| W04G3.6b | |||||||||
| W04G3.6c | |||||||||
| W04G3.6d | |||||||||
| Corresponding_CDS_history | W04G3.6:wp131 | ||||||||
| W04G3.6:wp148 | |||||||||
| W04G3.9:wp131 | |||||||||
| Corresponding_transcript | W04G3.6a.1 | ||||||||
| W04G3.6b.1 | |||||||||
| W04G3.6c.1 | |||||||||
| W04G3.6d.1 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf648519 | ||||||||
| WBsf236348 | |||||||||
| WBsf236349 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054786 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019604 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019603 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054785 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3253 | ||||||||
| Expr1013550 | |||||||||
| Expr1158326 | |||||||||
| Expr2017118 | |||||||||
| Expr2035254 | |||||||||
| Drives_construct | WBCnstr00011256 | ||||||||
| WBCnstr00030043 | |||||||||
| Construct_product | WBCnstr00030043 | ||||||||
| Microarray_results (40) | |||||||||
| Expression_cluster (74) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | X | Position | 2.85827 | |||||
| Positive | Positive_clone | W04G3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025075 | ||||||||
| WBPaper00035539 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
