WormBase Tree Display for Gene: WBGene00021305
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| WBGene00021305 | SMap | S_parent | Sequence | Y32G9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | zig-11 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y32G9A.8 | ||||||||
| Molecular_name | Y32G9A.8a | ||||||||
| Y32G9A.8a.1 | |||||||||
| CE31101 | |||||||||
| Y32G9A.8b | |||||||||
| CE51045 | |||||||||
| Y32G9A.8a.2 | |||||||||
| Y32G9A.8b.1 | |||||||||
| Other_name | oig-6 | Person_evidence | WBPerson260 | ||||||
| CELE_Y32G9A.8 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | zig-11 | ||||||||
| DB_info | Database | AceView | gene | 5C352 | |||||
| WormQTL | gene | WBGene00021305 | |||||||
| WormFlux | gene | WBGene00021305 | |||||||
| NDB | locus_tag | CELE_Y32G9A.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021305|UniProtKB=Q9BPN5 | |||||||
| family | PTHR10075 | ||||||||
| NCBI | gene | 189580 | |||||||
| RefSeq | protein | NM_071122.8 | |||||||
| NM_001313300.3 | |||||||||
| TrEMBL | UniProtAcc | Q9BPN5 | |||||||
| A0A0K3AY85 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9BPN5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 Feb 2012 15:34:46 | WBPerson2970 | Name_change | CGC_name | oig-6 | ||||
| 3 | 05 Nov 2015 12:33:59 | WBPerson2970 | Name_change | CGC_name | zig-11 | ||||
| Other_name | oig-6 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | zig | ||||||||
| Allele (320) | |||||||||
| Strain | WBStrain00032531 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001639 | ||||||||
| 00001640 | |||||||||
| 00001641 | |||||||||
| 00001642 | |||||||||
| 00001643 | |||||||||
| 00001644 | |||||||||
| 00001645 | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00004370 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00006978 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006979 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006980 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006981 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006983 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006984 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WBGene00017184 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable cell-cell adhesion mediator activity. Predicted to be involved in axon guidance; dendrite self-avoidance; and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in axon and plasma membrane. Human ortholog(s) of this gene implicated in breast ductal carcinoma; carcinoma (multiple); and cervical cancer. Is an ortholog of human BSG (basigin (Ok blood group)) and NPTN (neuroplastin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1116) | ||||
| DOID:3007 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1116) | ||||||
| DOID:5744 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1116) | ||||||
| DOID:2871 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1116) | ||||||
| DOID:2671 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1116) | ||||||
| DOID:4362 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1116) | ||||||
| DOID:3907 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1116) | ||||||
| Molecular_info | Corresponding_CDS | Y32G9A.8a | |||||||
| Y32G9A.8b | |||||||||
| Corresponding_transcript | Y32G9A.8a.1 | ||||||||
| Y32G9A.8a.2 | |||||||||
| Y32G9A.8b.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055799 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053009 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011670 | ||||||||
| Expr1039288 | |||||||||
| Expr1159333 | |||||||||
| Expr2018138 | |||||||||
| Expr2036275 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction | WBInteraction000552117 | ||||||||
| WBInteraction000553010 | |||||||||
| WBInteraction000581206 | |||||||||
| WBInteraction000586471 | |||||||||
| Map_info | Map | V | Position | -16.8815 | |||||
| Positive | Positive_clone | Y32G9A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
