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WormBase Tree Display for Gene: WBGene00024046

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Name Class

WBGene00024046SMapS_parentSequencecb25.fpc0011c
IdentityVersion2
NameCGC_nameCbr-hel-1From_analysisInferred_from_orthology
Sequence_nameCBG00694
Molecular_nameCBG00694
CBG00694.1
CBP05782
Other_nameCBG_00694Accession_evidenceNDBHE600999
Public_nameCbr-hel-1
DB_infoDatabaseNDBlocus_tagCBG_00694
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:53WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-hel-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhel
RNASeq_FPKMWBls:0000002293.83From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
306.085From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
326.835From_analysisRNASeq.briggsae.WBls:0000002.control_mean
380.589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
340.429From_analysisRNASeq.briggsae.WBls:0000002.control_mean
343.337From_analysisRNASeq.briggsae.WBls:0000002.control_median
381.211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031225.94From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
1291.18From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1356.41From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
1314.43From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1360.94From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041139.24From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1151.29From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1163.33From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1174.69From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1201.55From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1263.11From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1267.36From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024177.294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
200.955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
265.775From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
270.77From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
280.794From_analysisRNASeq.briggsae.WBls:0000024.control_median
290.818From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
298.923From_analysisRNASeq.briggsae.WBls:0000024.control_mean
368.331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
97.2638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
106.483From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
108.977From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
180.447From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
WBls:0000027144.695From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
174.83From_analysisRNASeq.briggsae.WBls:0000027.control_mean
328.562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
51.2319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
171.314From_analysisRNASeq.briggsae.WBls:0000027.control_median
180.606From_analysisRNASeq.briggsae.WBls:0000027.control_mean
197.934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035254.035From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038225.384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
236.053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
253.227From_analysisRNASeq.briggsae.WBls:0000038.control_mean
254.32From_analysisRNASeq.briggsae.WBls:0000038.control_median
272.586From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
278.885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041287.674From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
341.452From_analysisRNASeq.briggsae.WBls:0000041.control_mean
350.746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
351.453From_analysisRNASeq.briggsae.WBls:0000041.control_median
352.159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
375.227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
224.639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
280.22From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
311.777From_analysisRNASeq.briggsae.WBls:0000041.control_mean
319.21From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063368.158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
368.814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
379.733From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
395.021From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
432.862From_analysisRNASeq.briggsae.WBls:0000063.control_mean
652.583From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
313.073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
374.273From_analysisRNASeq.briggsae.WBls:0000063.control_median
412.897From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101328.562From_analysisRNASeq.briggsae.total_over_all_stages.control_median
426.988From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
339.654From_analysisRNASeq.briggsae.total_over_all_stages.control_median
495.943From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127392
00127393
OrthologWBGene00001840Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00053875Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00146049Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00129790Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g7450Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13672Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4268Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16997Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21833Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16828Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2021Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9284Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1596Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19375Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_24356.g27152Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-hel-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17447Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00124.g4982Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08698Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004999Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01174Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7386Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20136400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00233959Brugia malayiFrom_analysisWormBase-Compara
chrII_pilon.g5219Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240547Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00112028Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00258061Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293399Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00023542Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026110Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026478Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026745Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026766Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026902Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027664Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029014Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029230Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030740Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030815Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030870Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031298Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031335Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031575Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032524Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032620Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033030Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033411Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033451Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033648Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033744Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034417Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034589Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034647Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035298Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036400Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036557Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039604Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040788Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271602Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and nucleic acid binding activity. Is an ortholog of C. elegans hel-1. In C. elegans, hel-1 is involved in determination of adult lifespan; nuclear mRNA surveillance; and positive regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG00694
Corresponding_CDS_historyCBG00694:bp194
Corresponding_transcriptCBG00694.1
Other_sequenceEX912051.1
RSC01960_1
CR06661
Oden_isotig09787
FG620679.1
CJC00226_1
ACC33658_1
EX547451.1
EX560458.1
MP00044
FD514943.1
ACC06448_1
FE915326.1
TMC01031_1
GPC00030_1
XI05121
EY459766.1
FG972031.1
Oden_isotig09786
EX556265.1
EX014516.1
CJC02681_1
EX916483.1
CJC07271_1
FC551108.1
FC542284.1
Oden_isotig16782
FF678400.1
FG620092.1
FG620626.1
FG620783.1
DN558317.1
EX011620.1
TSC02597_1
ES569081.1
HG04835
MA00537
ES568393.1
FE916561.1
MCC00609_1
FC545785.1
MH03616
Tcol_isotig10302
Dviv_isotig05255
JI470028.1
TMC01208_1
Name_isotig03899
ES565815.1
TSC07983_1
FC542414.1
Name_isotig02657
ES562284.1
AW308639.1
GP01781
EX559951.1
FE913459.1
CRC03699_1
ES409912.1
Dviv_isotig05261
Dviv_isotig29128
MI04800
CBC01632_1
ES408670.1
FE912138.1
BE217672.1
CR12216
Acan_isotig05977
GO251567.1
Tcol_isotig10301
ES563760.1
ACC02263_1
DN556979.1
RSC01044_1
ES561972.1
BUC00641_1
ACC13415_1
ES562936.1
OOC02775_1
Oden_isotig09785
FC539946.1
NAC01553_1
EX013163.1
HBC22744_1
GO249041.1
Dviv_isotig05258
ASC35247_1
FE912152.1
OVC03569_1
ACC02201_1
CR10317
JI481248.1
EX914080.1
FE918920.1
EX910421.1
Dviv_isotig05254
XIC04196_1
EX553143.1
FC548068.1
NB09759
ES562617.1
FC545890.1
HGC11800_1
TS01921
FK807329.1
FG620738.1
FG620621.1
CGC00079_1
JI170024.1
MPC00047_1
EX911240.1
TSC11398_1
EX008987.1
MI02927
FE912334.1
FC554632.1
BU087007.1
MH09486
FC551619.1
JI480013.1
Hbac_isotig00409
FG620733.1
BMC06617_1
MI01340
SRC02981_1
AS07736
Dviv_isotig05263
EX915268.1
ES570595.1
BQ804091.1
Dviv_isotig05264
MIC00759_1
FE912336.1
ES569064.1
FC546299.1
FG620423.1
GO252814.1
MAC00073_1
EX566137.1
FC539702.1
HO243993.1
EX557888.1
FE917475.1
ASC36693_1
BXC01698_1
PPC00639_1
MIC03661_1
ES743575.1
Acan_isotig03691
EY472242.1
EY469533.1
FG620788.1
LSC00340_1
FG620428.1
Tcir_isotig06701
EX565385.1
FC549795.1
EY468524.1
TS01485
Dviv_isotig05256
RS06358
FC553638.1
MPC00522_1
ASC01245_1
EX563096.1
ACC22702_1
EX562071.1
TS00322
FC555307.1
TM00532
MC01467
EX007358.1
Dviv_isotig05253
MH05686
FE919190.1
RS07173
PP00294
SSC02692_1
FE912153.1
ACC10107_1
ASC23422_1
Hbac_isotig00410
Acan_isotig03692
CSC01666_1
FC555605.1
MH01960
HG00893
Dviv_isotig05257
MP00259
GRC03351_1
JO472440.1
Dviv_isotig05260
XI00249
TM00179
FC539430.1
FF678656.1
ES569045.1
HC05968
Dviv_isotig05259
FK802605.1
MHC11405_1
CGC01414_1
TS03395
FG620537.1
FG620686.1
FG620532.1
FG619991.1
HGC02982_1
EX564285.1
ES569060.1
GR14863
CR09680
Acan_isotig05976
CGC01368_1
SR01998
ACC19371_1
CR06815
AS00647
SS00576
ACC24015_1
EX558838.1
NBC03390_1
TSC00255_1
TMC02555_1
XIC00285_1
HBC01106_1
ES561224.1
GO252043.1
CBC00343_1
BXC00170_1
JI167317.1
CR02793
EX914228.1
EX009851.1
Dviv_isotig05262
CRC00383_1
MHC00991_1
HBC06737_1
HCC00185_1
JO472640.1
ES743338.1
Experimental_infoExpr_patternExpr1058567
Microarray_resultsGPL8303_CB6_WBGene00024046_A
GPL8303_CB6_WBGene00024046_B
GPL14143_CBG00694_851-910_0.673_49_C
GPL14143_CBG00694_1037-1096_0.738_23_B
GPL14143_CBG00694_1185-1244_0.733_25_A
MethodGene