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WormBase Tree Display for Gene: WBGene00058819

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Name Class

WBGene00058819SMapS_parentSequenceCrem_Contig8
IdentityVersion3
NameCGC_nameCre-crt-1From_analysisInferred_from_orthology
Sequence_nameCRE31098
Molecular_nameCRE31098
CRE31098.1
RP12100
Other_namecr01.sctg13.wum.10
Public_nameCre-crt-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-crt-1
303 Jul 2008 11:45:20WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE31098
Other_namecr01.sctg13.wum.10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcrt
RNASeq_FPKMWBls:0000004368.792From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
372.139From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
375.486From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:00000241044.56From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
1189.48From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
1242.54From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
1245.01From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
1267.85From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
1333.14From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
1410.41From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
1427.25From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
1594.77From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
1601.04From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
1722.74From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
1728.57From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
1874.56From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
1910.2From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
2031.47From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
2064.08From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
250.794From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
262.776From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
271.527From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
280.337From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
326.421From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
355.094From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
357.008From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
365.938From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
369.154From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
380.05From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
388.744From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
440.585From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
465.897From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
474.117From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
478.804From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
503.886From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
522.344From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
531.066From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
540.54From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
544.59From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
550.766From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
555.175From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
557.934From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
581.103From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
597.142From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
617.803From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
688.144From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
696.499From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
738.372From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
791.795From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
855.587From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
863.614From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
908.639From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
962.175From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
968.474From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
976.869From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
994.662From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
WBls:00000271340.35From_analysisRNASeq.remanei.WBls:0000027.control_mean
1500.57From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
1547.64From_analysisRNASeq.remanei.WBls:0000027.control_median
1594.7From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1604.61From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
661.519From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:00000381343.5From_analysisRNASeq.remanei.WBls:0000038.control_mean
1609.78From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
1619.12From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
801.598From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041528.331From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
583.333From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
586.908From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
703.024From_analysisRNASeq.remanei.WBls:0000041.control_median
739.461From_analysisRNASeq.remanei.WBls:0000041.control_mean
819.14From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
930.272From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
988.783From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:00000631059.62From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
1089.96From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
1116.66From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
1122.16From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
1157.6From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
1509.79From_analysisRNASeq.remanei.WBls:0000063.control_median
1518.48From_analysisRNASeq.remanei.WBls:0000063.control_mean
1861.98From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
1876.35From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
1938.58From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
1979.31From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
1982.6From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
WBls:00001011103.31From_analysisRNASeq.remanei.total_over_all_stages.control_median
1144.53From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00154284
00154285
00154286
00154287
OrthologWBGene00000802Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00030869Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00163782Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00149953Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00097616Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00138385Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00226673Brugia malayiFrom_analysisWormBase-Compara
WBGene00244720Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00283483Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g405Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6328Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4948Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21240Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19414Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10180Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5217Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2627Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g8276Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24529Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-crt-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold7.g13Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00499.g12129Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_17139Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_17144Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017871Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08052Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2646Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50206600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14377Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00264586Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286536Trichuris murisFrom_analysisWormBase-Compara
WBGene00287870Trichuris murisFrom_analysisWormBase-Compara
WBGene00289302Trichuris murisFrom_analysisWormBase-Compara
WBGene00291593Trichuris murisFrom_analysisWormBase-Compara
WBGene00302768Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00055013Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity and unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in endoplasmic reticulum. Is an ortholog of C. elegans crt-1. In C. elegans, crt-1 is involved in several processes, including IRE1-mediated unfolded protein response; determination of adult lifespan; and hemidesmosome assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE31098
Corresponding_transcriptCRE31098.1
Other_sequenceNB12095
ES743663.1
GW410848.1
PVC01982_1
HBC00231_1
GO239236.1
EX009103.1
HSC00996_1
EW742320.1
EX913088.1
CBC00113_1
Tcol_isotig04079
FG974735.1
PPC00388_1
FK808623.1
FC811593.1
SRC07317_1
FG979597.1
FG976846.1
GQ396798.1
EX549298.1
BF599213.1
FK800143.1
BXC01393_1
EX010351.1
HG07620
EX914867.1
EX914017.1
HC02895
AW288154.1
DVC00700_1
HS00702
FF680619.1
FK804151.1
CJC08093_1
PTC00804_1
TS00444
FC816827.1
BMC12460_1
BXC04544_1
FF680034.1
FK804448.1
JI176432.1
HC01319
FC818469.1
AI601087.1
CRC09986_1
SRC09014_1
OVC01148_1
Dviv_isotig28546
EU360890.1
EX547360.1
CR10158
FG974663.1
AF052978.1
CR06782
FC811926.1
GR978289.1
BG577619.1
HS01102
Tcol_isotig04049
HC03456
SRC08177_1
ES570222.1
ACC00406_1
FC817523.1
ES738992.1
GW406852.1
HC00341
SSC05304_1
FC819861.1
NB10625
EX911881.1
HBC03265_1
SRC08389_1
FC814815.1
FG975235.1
GW406986.1
FK800686.1
BMC12472_1
HC03140
FK801733.1
AJ006790.1
FC814983.1
DI00926
EX547612.1
FG980835.1
AI438743.1
SRC07132_1
BMC03611_1
JI476030.1
FC818801.1
EX541018.1
SSC00126_1
CSC01006_1
ACC06019_1
EX912330.1
EX534766.1
SRC08312_1
SRC09010_1
FF679260.1
FC541675.1
EX538674.1
JI462386.1
JI467314.1
FE917627.1
AE03945
FD514481.1
FC814946.1
CBC09215_1
MIC05398_1
BM277319.1
EX915989.1
FG975079.1
CBC00837_1
EX013424.1
TMC00495_1
GW413452.1
HGC10407_1
BF199430.1
Tcol_isotig04080
AI665769.1
JI467003.1
HG03578
FK805958.1
FC815558.1
JI169385.1
TSC01562_1
TSC08361_1
FC817154.1
EX007454.1
SS01569
DA06094
EX912716.1
EX009944.1
AI692154.1
AW288222.1
SRC08876_1
ES408955.1
EX535407.1
ES566192.1
FG977401.1
Tcir_isotig16138
AW288141.1
BM174321.1
BMC13759_1
CD455808.1
BE239196.1
MIC02964_1
AI374093.1
FG976762.1
EX010231.1
SRC08917_1
FF678582.1
EX013901.1
GU013560.1
FC819542.1
FC813921.1
ES411154.1
CR12508
HG05027
Acan_isotig08324
HG08804
RS06031
DIC00306_1
CR02845
SRC10353_1
FF679862.1
ES562269.1
AJ001621.1
RS09752
PT00127
ES409800.1
FD515482.1
XIC05692_1
FK808957.1
Tcol_isotig04050
CR07587
XI00925
AE02089
DAC00389_1
HC01819
Name_isotig01181
EX502563.1
GQ150476.1
AS00961
JI169766.1
BU087110.1
FF679885.1
CR10157
AE00766
SC00167
HCC00592_1
ES410697.1
XIC00780_1
HBC17290_1
AI111223.1
TMC01489_1
OOC00066_1
FC811319.1
BM174370.1
BG467567.1
CRC00528_1
GT571135.1
PP00609
HG02597
FC553145.1
ES739710.1
FC550572.1
ES409078.1
FG978910.1
JI172767.1
HSC00338_1
CJC00580_3
AA668089.1
RS07319
FC545220.1
EW741997.1
BF400366.1
HGC01952_1
EX542237.1
BMC12461_1
AI368270.1
FK802530.1
FG580656.1
EV851270.1
ES741528.1
ES411668.1
JO473368.1
FF678369.1
AM296015.1
MHC03324_1
NBC00808_1
CR11420
ASC16533_1
Oden_isotig17754
ES413809.1
JI245261.1
GU585910.1
FG971623.1
NB08442
NAC00261_1
BMC04366_1
HBC10085_1
JI461351.1
CJC01164_1
PPC00042_1
MH08133
FG975137.1
ES740916.1
EX564470.1
AF402771.1
SR01041
FF679531.1
AYC04225_1
M20565.1
SRC10455_1
PSC02604
BUC00817_1
HG00221
EX007723.1
FG971182.1
SRC09491_1
FG977817.1
SRC08458_1
FK806655.1
MI02454
AYC02576_1
GR978885.1
Tcol_isotig04051
OVC03948_1
RSC04344_1
FE919714.1
SRC00185_1
GR977876.1
EL889874.1
ES410159.1
BMC06194_1
GR978038.1
JI173600.1
FF679385.1
EX014870.1
AI603821.1
FF678664.1
TM01780
FC809636.1
EX551539.1
CJC00580_1
SRC08771_1
EX549852.1
FK809402.1
FK803046.1
FF681496.1
FE917607.1
FK808345.1
FG978119.1
ES739911.1
FE913559.1
OVC08131_1
FF679199.1
Hbac_isotig01528
FC813083.1
SRC08360_1
EX010015.1
ACC22445_1
CD455381.1
HQ843774.1
FC809666.1
XI05009
XIC01238_1
SRC09241_1
FG972068.1
Experimental_infoExpr_patternExpr1109148
Microarray_resultsGPL14146_CRE31098_1027-1086_0.915_22_B
GPL14146_CRE31098_1269-1328_0.950_4_A
GPL14146_CRE31098_869-928_0.881_36_C
Expression_clusterWBPaper00054996:activated_sperm_CRE
WBPaper00054996:membranous_oraganelle_CRE
MethodGene