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WormBase Tree Display for Gene: WBGene00069639

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Name Class

WBGene00069639SMapS_parentSequenceCrem_Contig158
IdentityVersion3
NameCGC_nameCre-vps-33.1From_analysisInferred_from_orthology
Sequence_nameCRE23103
Molecular_nameCRE23103
CRE23103.1
RP31145
Other_namecr01.sctg154.wum.34
Public_nameCre-vps-33.1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-vps-33.1
303 Jul 2008 11:46:26WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE23103
Other_namecr01.sctg154.wum.34
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvps
RNASeq_FPKMWBls:00000044.81444From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
6.21754From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
7.62063From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:000002410.1204From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
10.8872From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
11.2131From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
12.1328From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
12.805From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
2.14422From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
2.78726From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
3.18614From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
3.30782From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
3.55171From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
3.63113From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
3.65365From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
3.79514From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
3.92547From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
4.09927From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
4.27823From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
4.30709From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
4.36049From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
4.67327From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
4.88953From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
4.9815From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
5.0358From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
5.12588From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
5.13711From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
5.27663From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
5.3479From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
5.57292From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
5.62708From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
5.74914From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
5.84152From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
5.89751From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
5.97554From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
5.99078From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
6.11302From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
6.11426From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
6.17931From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
6.36485From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
6.40472From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
6.44287From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
6.88307From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
7.01617From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
7.45707From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
7.47303From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
7.5509From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
7.5683From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
7.58375From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
7.60291From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
8.09648From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
8.27715From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
8.28034From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
8.52427From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
9.17582From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
9.46179From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
WBls:00000271.11327From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
2.9903From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
3.22082From_analysisRNASeq.remanei.WBls:0000027.control_median
3.45134From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
3.84234From_analysisRNASeq.remanei.WBls:0000027.control_mean
7.81446From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381.44935From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
1.76405From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
1.99427From_analysisRNASeq.remanei.WBls:0000038.control_mean
2.76942From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004113.9851From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
15.5002From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
16.4085From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
4.0244From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
4.12445From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
4.18049From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
9.0828From_analysisRNASeq.remanei.WBls:0000041.control_median
9.70386From_analysisRNASeq.remanei.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
2.91215From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
3.27326From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
3.88195From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
3.97638From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
4.24325From_analysisRNASeq.remanei.WBls:0000063.control_median
4.48981From_analysisRNASeq.remanei.WBls:0000063.control_mean
4.51011From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
5.65947From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
6.01263From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
6.84283From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
7.82927From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
WBls:00001014.07443From_analysisRNASeq.remanei.total_over_all_stages.control_median
5.26571From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00163969
OrthologWBGene00015130Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00016960Caenorhabditis elegansFrom_analysisTreeFam
WBGene00035639Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00141342Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00161372Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00193355Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00152678Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00135975Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00115057Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00231056Brugia malayiFrom_analysisWormBase-Compara
WBGene00245439Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g5065Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5218Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18141Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10397Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15413Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8517Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9332Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13297Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6141Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1368Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00269.g8206Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vps-33.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9831Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_06902.g37143Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_07311.g37612Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_11458.g40384Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18431Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_18434Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008598Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13466Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13469Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g6824Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30273600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8454Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00263137Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293195Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00054122Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00051283Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00055773Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00060193Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064553Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00069637Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans vps-33.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE23103
Corresponding_transcriptCRE23103.1
Other_sequenceFK803836.1
AYC03903_1
Dviv_isotig18332
Dviv_isotig18331
Acan_isotig08253
Oden_isotig23037
Dviv_isotig32629
AE00233
Experimental_infoExpr_patternExpr1100223
Microarray_resultsGPL14146_CRE23103_733-792_0.874_48_C
GPL14146_CRE23103_833-892_0.926_8_B
GPL14146_CRE23103_987-1046_0.807_81_A
MethodGene