Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00102093

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00102093SMapS_parentSequencePPA_ChrI
IdentityVersion1
NameSequence_namePPA12539
Molecular_namePPA12539
PPA12539.1
PP58375
Other_nameGENEPREDICTION_SNAP300000069400
UMM-S71-40.40Person_evidenceWBPerson606
Public_namePPA12539
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00178928
00178929
OrthologWBGene00144403Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154316Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027004Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223544Brugia malayiFrom_analysisWormBase-Compara
WBGene00006817Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007277Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00133407Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00246820Onchocerca volvulusFrom_analysisWormBase-Compara
CSP26.g20766Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g404Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8034Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20056Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17855Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12408Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16133Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g338Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18346Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g18349Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00088.g3972Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00127.g5093Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g5102Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold492.g2113Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02946.g28493Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03778.g31229Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_22711Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003807Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02442Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g6745Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20223800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00073181Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073184Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g4301Caenorhabditis elegansFrom_analysisWormBase-Compara
chrI_pilon.g1875Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00261010Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262973Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292579Trichuris murisFrom_analysisWormBase-Compara
WBGene00297876Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00097763Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in chromatin organization. Predicted to be located in nucleus. Is an ortholog of C. elegans asfl-1 and unc-85. In C. elegans, unc-85 is involved in egg-laying behavior and post-embryonic development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA12539
Corresponding_transcriptPPA12539.1
Experimental_infoMicroarray_resultsGPL14372_Probes_10504
GPL14372_Probes_10505
MethodGene