WormBase Tree Display for Gene: WBGene00102177

WBGene00102177 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 3
    Name: CGC_name: Ppa-rap-2 Inferred_automatically: from gene merge
      Sequence_name: PPA12623
      Molecular_name: PPA12623
        PPA12623.1
        PP71695
      Other_name: GENEPREDICTION_SNAP300000069484
        GENEPREDICTION_SNAP300000069485
        UMM-S71-36.60 Person_evidence: WBPerson606
      Public_name: Ppa-rap-2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 17 Nov 2017 15:19:42 WBPerson4055 Name_change: CGC_name: Ppa-rap-2
        3 24 Nov 2017 09:46:49 WBPerson4055 Event: Acquires_merge: WBGene00102178
      Acquires_merge: WBGene00102178
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rap
    RNASeq_FPKM: WBls:0000032 6.4957 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 11.5082 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        6.0013 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        6.4957 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    GO_annotation: 00178977
      00178978
      00178979
      00178980
    Ortholog (33)
    Paralog: WBGene00090497 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091142 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092860 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095293 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113391 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117419 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00203549 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277005 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280690 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in signal transduction. Predicted to be located in membrane. Is an ortholog of C. elegans rap-2. In C. elegans, rap-2 is involved in collagen and cuticulin-based cuticle development and epidermis development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA12623
    Corresponding_transcript: PPA12623.1
    Other_sequence (78)
  Experimental_info: Microarray_results: GPL14372_Probes_10790
      GPL14372_Probes_10791
      GPL14372_Probes_10792
      GPL14372_Probes_10793
      GPL14372_Probes_10794
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene