WormBase Tree Display for Gene: WBGene00111009

WBGene00111009 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 3
    Name: Sequence_name: PPA21455
      Molecular_name: PPA21455
        PPA21455.1
        PP63902
      Other_name: GENEPREDICTION_SNAP300000078201
        GENEPREDICTION_SNAP300000085569
        GENEPREDICTION_SNAP300000085570
        UMM-S259-13.75 Person_evidence: WBPerson606
      Public_name: PPA21455
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00118331
        3 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00118332
      Acquires_merge: WBGene00118331
        WBGene00118332
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 11.5407 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 11.5407 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        19.7492 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        47.7069 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00182967
      00182968
      00182969
    Ortholog (72)
    Paralog: WBGene00093955 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00098490 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00111008 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00118328 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00100627 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111006 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280731 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280781 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280829 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lysozyme activity. Predicted to be involved in cell wall macromolecule catabolic process and peptidoglycan catabolic process. Is an ortholog of C. elegans lys-4; lys-5; and lys-10. In C. elegans, lys-4 is involved in defense response to Gram-positive bacterium. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA21455
    Corresponding_transcript: PPA21455.1
    Other_sequence (59)
  Experimental_info: Microarray_results: GPL14372_Probes_63059
      GPL14372_Probes_63060
      GPL14372_Probes_63061
      GPL14372_Probes_63063
      GPL14372_Probes_63064
      GPL14372_Probes_63066
      GPL14372_Probes_63067
    Expression_cluster: WBPaper00041207:PP_dauer_down
      WBPaper00041606:PP_S.marcescens_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene