WormBase Tree Display for Gene: WBGene00111218

WBGene00111218 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 1
    Name: Sequence_name: PPA21664
      Molecular_name: PPA21664
        PPA21664.1
        PP55880
      Other_name: GENEPREDICTION_SNAP300000078405
        UMM-S207-6.43 Person_evidence: WBPerson606
      Public_name: PPA21664
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 4.50227 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 2.38691 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        2.65847 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00183074
      00183075
      00183076
      00183077
    Ortholog: WBGene00013235 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
      WBGene00034090 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00063007 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00125493 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00144700 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00150069 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153368 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00192576 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00026623 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027761 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00225196 Brugia malayi From_analysis: WormBase-Compara
      WBGene00003626 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003659 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044354 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00129322 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133803 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00239074 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g3592 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g9942 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7357 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g9605 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1047 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g7285 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14139 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g7870 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23015 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g4546 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19235 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g6090 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12479 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g8125 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21028 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g22156 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1337 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g15601 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g10537 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g6971 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00042.g2313 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-nhr-69 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10128 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14852 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14853 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00070.g3267 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00070.g3269 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_01521.g21458 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01914 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_17589 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000713 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_025411 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01758 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13148 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15071 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10178800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_X0153600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00057256 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00058750 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrIII_pilon.g8073 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrI_pilon.g1922 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrX_pilon.g20375 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00258561 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00089818 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00089946 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090068 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091860 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091968 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00094553 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096415 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096517 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096533 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096534 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097935 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097940 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098478 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100340 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100397 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100400 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100746 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105928 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108782 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109750 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110262 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110325 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110391 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111481 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113282 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113773 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115846 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116567 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116568 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116647 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116648 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116667 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00119102 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00119151 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00203758 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00204953 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00206029 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272098 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272318 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00275433 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276595 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276740 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276969 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277325 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277526 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277601 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278728 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278813 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278946 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279119 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279341 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279621 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279909 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280778 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280862 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281389 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00282340 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00282778 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304862 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305051 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305052 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305089 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans Y56A3A.16. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA21664
    Corresponding_transcript: PPA21664.1
    Other_sequence: MH08181
      MJ00492
      AYC02084_1
      BXC00578_1
      MJ00624
      MJ04336
      Acan_isotig07767
      MJC04292_1
      JI179251.1
      MJC04395_1
      MH00717
      MHC01775_1
      MI00597
      MHC05305_1
      MHC03389_1
      AE04478
      MH08264
  Experimental_info: Microarray_results: GPL14372_Probes_77584
      GPL14372_Probes_77586
      GPL14372_Probes_77588
      GPL14372_Probes_77589
      GPL14372_Probes_77590
      GPL14372_Probes_77591
      GPL14372_Probes_77592
      GPL14372_Probes_77593
      GPL14372_Probes_77602
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene