WormBase Tree Display for Gene: WBGene00111386

WBGene00111386 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 2
    Name: CGC_name: Ppa-fah-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA21832
      Molecular_name: PPA21832
        PPA21832.1
        PP54213
      Other_name: GENEPREDICTION_SNAP300000078573
        UMS-S207-14.2 Person_evidence: WBPerson606
      Public_name: Ppa-fah-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 23 Nov 2009 09:16:04 WBPerson2970 Name_change: CGC_name: Ppa-fah-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fah
    RNASeq_FPKM: WBls:0000032 3.81551 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 12.0159 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        3.81551 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        5.27714 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00183186
    Ortholog: WBGene00019620 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
      WBGene00027613 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
      WBGene00051504 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
      WBGene00139756 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
      WBGene00137035 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00234957 Brugia malayi From_analysis: WormBase-Compara
      WBGene00239341 Onchocerca volvulus From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01206 Oscheius tipulae From_analysis: WormBase-Compara
    Paralog: WBGene00097208 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105483 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111384 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276463 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304635 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305032 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in tRNA processing. Is an ortholog of C. elegans fah-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA21832
    Corresponding_transcript: PPA21832.1
    Other_sequence: Dviv_isotig05398
      Dviv_isotig05396
      Dviv_isotig05395
      Dviv_isotig05402
      Dviv_isotig05401
      Dviv_isotig05399
      PPC08563_1
      PPC21108_1
      Dviv_isotig05397
      Dviv_isotig05400
  Experimental_info: Microarray_results: GPL14372_Probes_77043
      GPL14372_Probes_77044
      GPL14372_Probes_77045
      GPL14372_Probes_77046
      GPL14372_Probes_77047
      GPL14372_Probes_77048
      GPL14372_Probes_77049
      GPL14372_Probes_77050
      GPL14372_Probes_77051
      GPL14372_Probes_77052
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene