WormBase Tree Display for Gene: WBGene00137492

WBGene00137492 SMap: S_parent: Sequence: Cjap.Contig17934
  Identity: Version: 2
    Name: CGC_name: Cjp-lon-2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA18287
      Molecular_name: CJA18287
        CJA18287.1
        JA66499
      Public_name: Cjp-lon-2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lon-2
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lon
    RNASeq_FPKM: WBls:0000004 20.9147 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 8.4106 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 6.09334 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        6.87262 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        7.6519 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 11.4626 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        13.6923 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        14.0391 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        18.5575 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        25.0943 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        25.2659 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        4.66545 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        7.69735 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        8.10733 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        9.23291 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
      WBls:0000101 11.9526 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        8.4106 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00201177
      00201178
      00201179
    Ortholog: WBGene00003056 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00034998 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00051787 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00192620 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g2322 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15836 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21997 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19071 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15518 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g23403 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8399 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13023 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26704 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12416 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-lon-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold622.g6300 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00053.g2681 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00616 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024311 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_X0250700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18964 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in regulation of signal transduction. Predicted to be located in collagen-containing extracellular matrix and plasma membrane. Is an ortholog of C. elegans lon-2. In C. elegans, lon-2 is involved in several processes, including negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway; regulation of cell migration; and regulation of mesodermal cell fate specification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA18287
    Corresponding_transcript: CJA18287.1
    Other_sequence: CR09868
      CGC00490_1
      CBC13859_1
      CJC03031_1
      JI243320.1
      CRC04307_1
  Experimental_info: Expr_pattern: Expr1082588
      Expr1089933
    Microarray_results: GPL14145_CJA10171_224-283_0.951_2_A
      GPL14145_CJA18287_1136-1195_0.911_5_A
      GPL14145_CJA18287_691-750_0.881_20_C
      GPL14145_CJA18287_808-867_0.922_2_B
  Method: Gene