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WormBase Tree Display for Gene: WBGene00143134

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Name Class

WBGene00143134SMapS_parentSequenceCbre_Contig9
IdentityVersion1
NameCGC_nameCbn-abl-1From_analysisInferred_from_orthology
Sequence_nameCBN04409
Molecular_nameCBN04409
CBN04409.1
CN19546
Other_nameCBN04409
Public_nameCbn-abl-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-abl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classabl
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.59001From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
3.40485From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
3.50321From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
3.83216From_analysisRNASeq.brenneri.WBls:0000002.control_mean
3.93193From_analysisRNASeq.brenneri.WBls:0000002.control_median
4.36065From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
4.82415From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
5.77248From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
5.96115From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
7.90509From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:000000415.1376From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
7.5688From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:000002411.5169From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
14.8087From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
15.2974From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
19.6952From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
20.5353From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000385.58764From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
6.23862From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
6.88959From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:00000411.96648From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.09285From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
2.11176From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
2.26894From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
2.56319From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
2.77969From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
2.81174From_analysisRNASeq.brenneri.WBls:0000041.control_median
2.8438From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
2.90099From_analysisRNASeq.brenneri.WBls:0000041.control_mean
2.96669From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
2.97642From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
3.46979From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
4.06229From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
4.39695From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
5.1367From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
6.7803From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
WBls:00001012.97642From_analysisRNASeq.brenneri.total_over_all_stages.control_median
3.62427From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00205709
00205710
00205711
00205712
00205713
OrthologWBGene00000018Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00027163Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00058433Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00113564Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00124120Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g11743Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9246Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3119Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5498Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15985Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25013Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2063Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14551Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19412Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20316Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00091.g4060Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g23457Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13783Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00039.g2136Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_008821Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11351Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5220Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0074300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19928Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246243Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263701Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00138934Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139948Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00141223Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142471Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142713Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142885Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143437Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00143961Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143978Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144050Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144682Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00145478Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00145958Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146905Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147528Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00148381Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148811Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00149048Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149405Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00150862Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152224Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152286Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152292Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152317Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00152541Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153332Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00154055Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154504Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00155099Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155995Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00156452Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156780Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157085Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157383Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157571Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158277Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158680Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159919Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159959Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00160203Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160789Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160801Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162249Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162593Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162774Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163128Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164771Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190357Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190394Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190947Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190996Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191407Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192358Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192370Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192630Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192796Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193090Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193356Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193527Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193647Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193919Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193964Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00140394Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00142452Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00142562Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00155867Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00160030Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00154546Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00150969Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00149052Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00145178Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00146827Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00145189Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00147480Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00157593Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00161521Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00146789Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00148700Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00194206Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00146954Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00159985Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00195052Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00146442Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00146860Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00148995Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00149110Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00149303Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00151857Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00152753Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00156374Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00158706Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00160958Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00190633Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00191859Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and non-membrane spanning protein tyrosine kinase activity. Is an ortholog of C. elegans abl-1. In C. elegans, abl-1 is involved in several processes, including defense response to other organism; negative regulation of DNA damage response, signal transduction by p53 class mediator; and negative regulation of engulfment of apoptotic cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN04409
Corresponding_transcriptCBN04409.1
Other_sequenceOden_isotig22797
Oden_isotig17235
CR09951
CR09999
JI165020.1
Acan_isotig08290
CRC03322_1
CR09872
Oden_isotig17236
CRC10628_1
CRC12454_1
Dviv_isotig23403
CJC12721_1
Experimental_infoMicroarray_resultsGPL14142_CBN04409_2277-2336_0.594_577_C
GPL14142_CBN04409_2451-2510_0.823_94_A
GPL14142_CBN04409_3736-3795_0.959_5_B
MethodGene