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WormBase Tree Display for Gene: WBGene00240556

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Name Class

WBGene00240556SMapS_parentSequenceOVOC_OM1b_209
IdentityVersion5
NameCGC_nameOvo-unc-2From_analysisInferred_from_orthology
Sequence_nameOVOC3747
Molecular_nameOVOC3747
OVOC3747.1
OVP14484
Public_nameOvo-unc-2
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-unc-2
328 May 2014 09:51:36WBPerson2062EventAcquires_mergeWBGene00240555
428 May 2014 09:51:36WBPerson2062EventAcquires_mergeWBGene00240557
528 May 2014 09:51:36WBPerson2062EventAcquires_mergeWBGene00240558
Acquires_mergeWBGene00240555
WBGene00240557
WBGene00240558
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00001010.321874From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
1.66732From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.029896From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
0.040292From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.125432From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
0.137804From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
0.15334From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
0.175613From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
0.188888From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
0.222535From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
0.234985From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.298034From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
0.322488From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
0.345714From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
0.578198From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
0.617403From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
0.624553From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
1.06464From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
WBls:00001072.13073From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.688589From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
11.0366From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
13.4785From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
8.40123From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
WBls:00006642.06399From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
2.25469From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
2.44539From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00254479
00254480
00254481
00254482
00254483
00254484
00254485
OrthologWBGene00190957Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00225754Brugia malayiFrom_analysisWormBase-Compara
WBGene00208334Caenorhabditis japonicaFrom_analysisWormBase-Compara
Cang_2012_03_13_00571.g12365Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4656Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Pan_g22163Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00259157Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286543Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00240711Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241830Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245319Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of B. malayi Bm5493.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC3747
Corresponding_CDS_historyOVOC3747:ov243
Corresponding_transcriptOVOC3747.1
Other_sequenceAI438322.1
OVC02901_1
FG348454.1
HG10298
MJ03899
EL887626.1
MP00593
MJ00466
JI475302.1
AS04607
JI481740.1
GO240034.1
EL887885.1
DA03049
SR01557
JI167392.1
GPC01142_1
HC09499
FG351540.1
MH02069
MC02494
MP01851
FG584874.1
Dviv_isotig31876
JI461714.1
MP01939
ES672639.1
MA01600
HC07330
FG588567.1
FE913993.1
FG587301.1
JI243465.1
MP00884
JI470515.1
MHC00234_1
GW410366.1
GO251567.1
MA02863
OF01441
AS08614
PSC00279
OFC01483_1
GP01734
CV200252.1
MP00816
Tcir_isotig18055
JI473279.1
JO471464.1
JI462131.1
JI212695.1
XI01620
JI168000.1
MP01839
Tcol_isotig24118
JI182171.1
MP00828
MAC00903_1
FG583620.1
MH03151
GO250442.1
MP01894
MP01840
FG351890.1
AS04712
ASC02691_1
CV200601.1
AS04853
MP01987
JI168646.1
ES672508.1
EL888799.1
FG587622.1
MP01129
MP00827
MCC05042_1
MP01008
FG349768.1
FG583224.1
EL888134.1
FK799870.1
MP01058
JI166832.1
JI470889.1
FE919190.1
MP00276
MH08809
JI467991.1
DA01167
JI247657.1
MP01821
Tcir_isotig28985
JI244268.1
FG581853.1
MP00856
FG355779.1
MH04170
CJC03454_1
GPC01895_1
EX008675.1
MP01834
BE224439.1
JI473851.1
JI469752.1
JI470053.1
MP00875
ES672096.1
MA01398
GW409749.1
MP01253
DA04091
MP00730
MPC00927_1
MP01861
Dviv_isotig27358
XI00304
ASC01420_1
JI470899.1
JI461663.1
BMC02560_1
FE919616.1
PT04923
MHC00657_1
BE217593.1
MP01062
ReferenceWBPaper00050453
MethodGene