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WormBase Tree Display for Gene: WBGene00244748

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Name Class

WBGene00244748SMapS_parentSequenceOVOC_OM3_53
IdentityVersion2
NameCGC_nameOvo-cgh-1From_analysisInferred_from_orthology
Sequence_nameOVOC7939
Molecular_nameOVOC7939
OVOC7939.1
OVP00606
Public_nameOvo-cgh-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-cgh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcgh
RNASeq_FPKMWBls:000010115.2839From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
18.1014From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:000010410.3558From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
12.0486From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
14.6035From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
14.6202From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
15.9477From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
16.0877From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
22.5707From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
23.7525From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
25.5074From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
4.62608From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
5.39127From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
58.6166From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
7.23221From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
7.59737From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
8.81283From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
9.63289From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
WBls:000010720.0348From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010818.9314From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
25.5393From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
28.7144From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
28.9722From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:000066425.6278From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
30.1308From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
34.6338From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00258539
00258540
OrthologWBGene00143378Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00030815Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00222319Brugia malayiFrom_analysisWormBase-Compara
WBGene00000479Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00136106Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g5598Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6028Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3039Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11324Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10502Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20967Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3344Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g3345Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g3346Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3224Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6871Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7905Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5875Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00001.g42Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_08527.g21559Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_15925.g25208Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_16533.g25390Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_18879.g26087Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cgh-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9876Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9877Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01243.g19536Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07346Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009011Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08409Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10182Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16814Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g22031Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g22057Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30050200Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_30050300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_30050400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00077354Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00092157Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g8171Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00259244Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293336Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237334Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237679Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237823Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238363Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238681Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238693Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239329Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239945Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240021Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240547Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240851Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241254Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241882Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242978Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243477Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243761Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244331Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244792Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245714Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246084Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246400Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246564Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247875Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248566Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248666Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248833Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248994Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00255440Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and nucleic acid binding activity. Is an ortholog of C. elegans cgh-1. In C. elegans, cgh-1 is involved in several processes, including P-body assembly; determination of adult lifespan; and negative regulation of translation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC7939
Corresponding_transcriptOVOC7939.1
Other_sequenceCGC00855_1
PPC00034_1
JI473802.1
EX501467.1
TS03070
SRC02895_1
ACC07332_1
XI05074
EY460212.1
BUC00107_1
EY461707.1
PP01158
EX501048.1
FC551390.1
TMC01353_1
JI214499.1
HG01011
Acan_isotig16758
Tcir_isotig15191
Oden_isotig18462
BXC01490_1
EX535982.1
FC546823.1
FC555673.1
CJC08288_1
SR03193
EY459626.1
JI462596.1
DI02051
EX916137.1
HGC02507_1
ES570878.1
Dviv_isotig22895
FC550389.1
HG11796
TM01663
CJC13232_1
XIC04134_1
FC819473.1
BMC02996_1
JI165585.1
FC554982.1
ES564773.1
EX564375.1
BXC05010_1
JI226897.1
AM157797.1
EY464182.1
FC553737.1
TSC00175_1
DIC01678_1
FC553320.1
GE626393.1
TS00858
CGC00485_1
BUC00755_1
DI02386
PP02300
PPC01408_1
Name_isotig02193
SR02107
EY462312.1
ES564269.1
HBC21987_1
ES561815.1
EX564040.1
ES567370.1
FC818250.1
FG583596.1
Acan_isotig07746
ES566154.1
ODC00055_1
FC819862.1
TM03230
BUC00957_1
MethodGene