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WormBase Tree Display for Gene: WBGene00246178

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Name Class

WBGene00246178SMapS_parentSequenceOVOC_OM3_103
IdentityVersion2
NameCGC_nameOvo-unc-25From_analysisInferred_from_orthology
Sequence_nameOVOC9369
Molecular_nameOVOC9369
OVOC9369.1
OVP01310
Public_nameOvo-unc-25
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-unc-25
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00001010.408604From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
9.43764From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.069779From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
0.107811From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
0.154922From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
0.242447From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
0.273135From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.303529From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
0.330586From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
0.481245From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
0.486622From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
0.738911From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
1.02611From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
1.22928From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
0From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
2.25554From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
WBls:000010747.9893From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010826.0897From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
26.6347From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
37.4162From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
59.5243From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066414.8534From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
20.0858From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
25.3181From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00260117
00260118
00260119
OrthologWBGene00139798Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141527Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035897Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226652Brugia malayiFrom_analysisWormBase-Compara
WBGene00006762Caenorhabditis elegansFrom_analysisWormBase-Compara
CBOVI.g4310Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4866Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16779Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1869Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10463Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5781Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5854Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8160Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2906Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14983Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00058.g2945Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00996.g15284Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13386.g24206Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-25Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18023Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00767.g15293Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14491Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010984Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03728Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03730Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1066Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g6908Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30292500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00063466Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00114297Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g9265Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00260019Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261020Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00237151Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240996Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241267Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241747Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247592Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbon-carbon lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in carboxylic acid metabolic process. Is an ortholog of C. elegans unc-25. In C. elegans, unc-25 is involved in GABAergic synaptic transmission.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC9369
Corresponding_transcriptOVOC9369.1
Other_sequenceFG354202.1
Hbac_isotig05684
EY468138.1
MC03561
Tcol_isotig21907
SS03390
FD517376.1
ACC21130_1
EY458874.1
RS07526
MI02837
MCC04968_1
Oden_isotig09330
FC540155.1
Oden_isotig09329
Oden_isotig21386
CJC05444_1
MIC02336_1
HG07015
CSC00871_1
Oden_isotig09326
HGC07403_1
MHC03583_1
Oden_isotig09325
FD515510.1
SSC05875_1
Dviv_isotig21501
FC542730.1
EY472227.1
EY460063.1
EY466600.1
EY466724.1
Oden_isotig09328
EY460608.1
SR01983
EY471474.1
BE225497.1
BE191682.1
AE04227
Tcol_isotig07709
RSC03380_1
EY462382.1
ACC07904_1
EY468820.1
SS02674
ACC27001_1
EY469312.1
Tcol_isotig07708
AYC03134_1
Acan_isotig06495
Dviv_isotig21500
EY467451.1
Tcol_isotig16685
ACC07095_1
FC540207.1
EY473675.1
SSC03394_1
Oden_isotig09327
MI03091
MH01102
FC542731.1
JI181538.1
CSC01592_1
EY465784.1
CBC15380_1
FC816641.1
MethodGene