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WormBase Tree Display for Gene: WBGene00248351

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Name Class

WBGene00248351SMapS_parentSequenceOVOC_OM4_173
IdentityVersion2
NameCGC_nameOvo-vhp-1From_analysisInferred_from_orthology
Sequence_nameOVOC11542
Molecular_nameOVOC11542
OVOC11542.1
OVP10577
Public_nameOvo-vhp-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-vhp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvhp
RNASeq_FPKMWBls:00001015.04919From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
8.22387From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001041.16431From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
1.61011From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
16.18From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
1.70903From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
1.82275From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
19.3801From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
2.31718From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
2.49258From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
2.59975From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
3.35817From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
4.12399From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
5.9744From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
6.0752From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
9.25199From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
9.27671From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
9.86695From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
WBls:000010712.4223From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010812.4173From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
12.7511From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
22.2001From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
3.63589From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066418.764From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
19.5608From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
20.3576From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00262285
00262286
00262287
OrthologWBGene00163516Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191715Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00025434Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223438Brugia malayiFrom_analysisWormBase-Compara
WBGene00006923Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122460Caenorhabditis japonicaFrom_analysisWormBase-Compara
CSP21.g7709Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15603Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g15604Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13585Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9838Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10851Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g24713Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3625Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g3626Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21989Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g7180Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00044.g2385Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vhp-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11474Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11475Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00082.g3701Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06028Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005993Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11067Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9655Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20100000Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00057397Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00109585Pristionchus pacificusFrom_analysisWormBase-Compara
chrII_pilon.g4463Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00266858Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285289Trichuris murisFrom_analysisWormBase-Compara
WBGene00285732Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237330Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237331Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237333Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238205Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239129Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240353Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244585Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245827Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246186Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246606Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247629Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248475Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248486Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Is an ortholog of C. elegans vhp-1. In C. elegans, vhp-1 is involved in several processes, including regulation of cellular response to stress; regulation of defense response to bacterium; and regulation of protein localization to nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC11542
Corresponding_transcriptOVOC11542.1
Other_sequenceAI511527.1
AW599946.1
OVC01893_1
OVC05499_1
JI478867.1
JI473331.1
Dviv_isotig09732
FC550648.1
FG351073.1
Dviv_isotig09730
Oden_isotig13596
FE919987.1
ACC40188_1
JI166399.1
EX540985.1
EX536175.1
EX555905.1
ACC01987_1
JI165833.1
FG583438.1
EX550663.1
FC553177.1
ACC02796_2
JI473981.1
Dviv_isotig09733
ASC03697_1
BMC08810_1
AE03990
ACC02796_1
JI166681.1
FG583554.1
EX564045.1
Oden_isotig13595
Acan_isotig00746
FC543599.1
FE910102.1
ACC09624_1
FC550509.1
CJC16716_1
BU666196.1
MH04045
JI251185.1
EY462537.1
GO239427.1
Dviv_isotig09729
AYC02245_1
FC552826.1
EX534537.1
JI254229.1
JI211463.1
AS11692
FG347346.1
FC550320.1
MethodGene