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WormBase Tree Display for Gene: WBGene00267812

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Name Class

WBGene00267812SMapS_parentSequenceSRAE_chrX_scaffold5
IdentityVersion1
NameSequence_nameSRAE_X000223200
Molecular_nameSRAE_X000223200
SRAE_X000223200.1
SRP00491
Public_nameSRAE_X000223200
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00006773.38087From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
3.58833From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
3.82267From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
4.02579From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
4.10693From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
4.37336From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:00006783.04307From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
3.19051From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
3.21585From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
3.22719From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
3.38462From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
4.01301From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
4.12988From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
4.39178From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:000068031.4585From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00278882
00278883
00278884
00278885
00278886
00278887
00278888
OrthologWBGene00163993Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00028228Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223086Brugia malayiFrom_analysisWormBase-Compara
WBGene00001187Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119574Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218636Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241830Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00091694Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00068721Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074138Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00079084Caenorhabditis remaneiFrom_analysisWormBase-Compara
CBOVI.g11260Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14641Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14855Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10788Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7498Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5334Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16346Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10312Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10914Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25194Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g860Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19423Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6184Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6185Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6186Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-egl-19Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21172Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00060.g2928Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18763Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03310Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7338Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40297810Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10827Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00294334Trichuris murisFrom_analysisWormBase-Compara
WBGene00296871Trichuris murisFrom_analysisWormBase-Compara
WBGene00301820Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00259157Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263078Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266153Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266270Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of C. elegans egl-19. In C. elegans, egl-19 is involved in several processes, including determination of left/right asymmetry in nervous system; positive regulation of striated muscle contraction; and regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_X000223200
Corresponding_transcriptSRAE_X000223200.1
Other_sequenceDN556605.1
JI461480.1
GE638965.1
ACC14460_1
Hbac_isotig04439
FK801242.1
JI482628.1
MI04909
JI462814.1
MIC03875_1
MJ02107
Dviv_isotig26740
TSC07525_1
MJ03328
MJC03409_1
LSC00039_1
Dviv_isotig28173
JI164149.1
FK801604.1
JI468580.1
ES567732.1
EX536716.1
Experimental_infoExpression_clusterWBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene