WormBase Tree Display for Variation: WBVar02125009
expand all nodes | collapse all nodes | view schema
| WBVar02125009 | Evidence | Paper_evidence | WBPaper00044031 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | my24 | |||||
| Other_name | F11A6.1a.2:c.1319C>T | ||||||
| CE17653:p.Pro440Leu | |||||||
| F11A6.1a.1:c.1319C>T | |||||||
| HGVSg | CHROMOSOME_I:g.11679199C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F11A6 | |||
| Flanking_sequences | atatgcacacggggaccagtgcaagtgctc | gttggctgctggaattgttgctcttgctcta | |||||
| Mapping_target | F11A6 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00044031 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | PT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00002232 | |||||
| Transcript | F11A6.1a.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| SIFT | 0 | deleterious | |||||
| PolyPhen | 1 | probably_damaging | |||||
| HGVSc | F11A6.1a.1:c.1319C>T | ||||||
| HGVSp | CE17653:p.Pro440Leu | ||||||
| cDNA_position | 1419 | ||||||
| CDS_position | 1319 | ||||||
| Protein_position | 440 | ||||||
| Exon_number | 5/9 | ||||||
| Codon_change | cCg/cTg | ||||||
| Amino_acid_change | P/L | ||||||
| F11A6.1a.2 (12) | |||||||
| Genetics | Interpolated_map_position | I | 9.5394 | ||||
| Reference | WBPaper00044031 | ||||||
| Method | Substitution_allele |
