WormBase Tree Display for Variation: WBVar00142961
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WBVar00142961 | Evidence | Paper_evidence | WBPaper00004891 | ||
---|---|---|---|---|---|
Name | Public_name | e102 | |||
Other_name | T10A3.1a.1:c.2207+1G>A | ||||
T10A3.1d.1:c.2162+1G>A | |||||
T10A3.1f.1:c.2162+1G>A | |||||
T10A3.1b.1:c.2207+1G>A | |||||
T10A3.1e.1:c.2168+1G>A | |||||
T10A3.1c.1:c.2168+1G>A | |||||
HGVSg | CHROMOSOME_X:g.7275968C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T10A3 | |
Flanking_sequences | tgtcgagctgattgttagtaggagtgcaat | taaatatacattttatttttaaactctgtc | |||
Mapping_target | T10A3 | ||||
Type_of_mutation | Substitution | g | a | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004100 | ||||
WBStrain00005508 | |||||
WBStrain00005509 | |||||
WBStrain00027194 | |||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00006750 | |||
Transcript | T10A3.1c.1 | VEP_consequence | splice_donor_variant | ||
VEP_impact | HIGH | ||||
HGVSc | T10A3.1c.1:c.2168+1G>A | ||||
Intron_number | 16/28 | ||||
T10A3.1d.1 | VEP_consequence | splice_donor_variant | |||
VEP_impact | HIGH | ||||
HGVSc | T10A3.1d.1:c.2162+1G>A | ||||
Intron_number | 16/27 | ||||
T10A3.1e.1 | VEP_consequence | splice_donor_variant | |||
VEP_impact | HIGH | ||||
HGVSc | T10A3.1e.1:c.2168+1G>A | ||||
Intron_number | 16/27 | ||||
T10A3.1b.1 | VEP_consequence | splice_donor_variant | |||
VEP_impact | HIGH | ||||
HGVSc | T10A3.1b.1:c.2207+1G>A | ||||
Intron_number | 15/27 | ||||
T10A3.1a.1 | VEP_consequence | splice_donor_variant | |||
VEP_impact | HIGH | ||||
HGVSc | T10A3.1a.1:c.2207+1G>A | ||||
Intron_number | 16/27 | ||||
T10A3.1f.1 | VEP_consequence | splice_donor_variant | |||
VEP_impact | HIGH | ||||
HGVSc | T10A3.1f.1:c.2162+1G>A | ||||
Intron_number | 16/26 | ||||
Isolation | Mutagen | EMS | |||
Genetics | Interpolated_map_position | X | -1.78183 | ||
Mapping_data | In_2_point (5) | ||||
In_multi_point | 164 | ||||
647 | |||||
1218 | |||||
1336 | |||||
1583 | |||||
1740 | |||||
2211 | |||||
2215 | |||||
2289 | |||||
2454 | |||||
2455 | |||||
2471 | |||||
3244 | |||||
In_pos_neg_data (13) | |||||
Description (2) | |||||
Reference | WBPaper00043908 | ||||
WBPaper00035074 | |||||
WBPaper00001709 | |||||
WBPaper00028886 | |||||
WBPaper00015500 | |||||
WBPaper00000031 | |||||
WBPaper00002487 | |||||
WBPaper00015253 | |||||
WBPaper00045955 | |||||
WBPaper00048427 | |||||
Method | Substitution_allele |