WormBase Tree Display for Variation: WBVar00072244
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WBVar00072244 | Name | Public_name | WBVar00072244 | |||
---|---|---|---|---|---|---|
Other_name | haw96604 | |||||
cewivar00264894 | ||||||
CE48258:p.Ala81Thr | ||||||
CE23279:p.Ala81Thr | ||||||
Y113G7A.8a.1:c.241G>A | ||||||
Y113G7A.8b.1:c.241G>A | ||||||
HGVSg | CHROMOSOME_V:g.20085783C>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y113G7A | ||
Flanking_sequences | tctcgtacatttttcaaaaaatcgg | tcccagggactttctgagcaataat | ||||
Mapping_target | Y113G7A | |||||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | ||||||
Status | Live | |||||
Affects | Gene | WBGene00001485 | ||||
Transcript | Y113G7A.8b.1 (12) | |||||
Y113G7A.8a.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
SIFT | 0.58 | tolerated | ||||
PolyPhen | 0.005 | benign | ||||
HGVSc | Y113G7A.8a.1:c.241G>A | |||||
HGVSp | CE23279:p.Ala81Thr | |||||
cDNA_position | 251 | |||||
CDS_position | 241 | |||||
Protein_position | 81 | |||||
Exon_number | 3/12 | |||||
Codon_change | Gcc/Acc | |||||
Amino_acid_change | A/T | |||||
Remark | [20081124 db] this Variation was previously named hw96604 | |||||
Method | WGS_Hawaiian_Waterston |