WormBase Tree Display for Variation: WBVar00017779
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WBVar00017779 | Evidence | Paper_evidence | WBPaper00030778 | ||
---|---|---|---|---|---|
WBPaper00055507 | |||||
Name | Public_name | WBVar00017779 | |||
Other_name | cbs16170 | ||||
cb16170 | Paper_evidence | WBPaper00055507 | |||
HGVSg | chrIV:g.12102648C>T | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc0081 | |
Flanking_sequences | gtccttggagatctgaaaaagagaa | gcgattgttaataaatgtgcaaaaa | |||
Mapping_target | cb25.fpc0081 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type (4) | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041077 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00027093 | |||
Transcript | CBG04423a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | CBG04423a.1:c.8542-14G>A | ||||
Intron_number | 11/16 | ||||
CBG04423b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG04423b.1:c.8569-14G>A | ||||
Intron_number | 11/16 | ||||
Reference | WBPaper00030778 | ||||
WBPaper00055507 | |||||
Remark | Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0 | ||||
This SNP was observed in 1 sequencing read(s) | |||||
Method | SNP |