WormBase Tree Display for Variation: WBVar00023726
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| WBVar00023726 | Name | Public_name | WBVar00023726 | ||
|---|---|---|---|---|---|
| Other_name | pas16342 | ||||
| Y39G10AR.3a.1:c.654+491A>G | |||||
| Y39G10AR.3b.1:c.540+491A>G | |||||
| HGVSg | CHROMOSOME_I:g.2360829A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y39G10AR | |
| Flanking_sequences | tactatgtggccgaggaattgagaaaactcggtcaccagttttttgcgtccacctggaatattttgaggtgaccaaactactaaatcaatttttcacctgtttttttttgtttttttttcgtattttggccacagaattttaattaacatttcgcaatgaattacttttaaacgactggtcgagaaaaaaaattcaagaaaatcaaaaaagtttaataaaaaacgattgtctaccgcaaattttgtaattttacaaaaatcgataattttttatctttgacgaaactgaatattttagac | aaagttattaagataacacaaaaatctgagaatgcgtattacacaacatatttgacgagcaaaatatctcgtaccgaaaactacagtaattctttaaatgactacagtaagtagtcaaaaagtcccatttcgttttgatcttcgaaaaatgcgggagttgagacgcagacatctcatctgatttcgcatggttaagagcgtgctgaagtcacaacttttctggaaaaatattcccgcattttttgtagatcaaattgtaatgagacagcctgacaccacgtgtaacgcttgtgtcgattt | |||
| Mapping_target | Y39G10AR | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00021461 | |||
| Transcript | Y39G10AR.3a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y39G10AR.3a.1:c.654+491A>G | ||||
| Intron_number | 5/20 | ||||
| Y39G10AR.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y39G10AR.3b.1:c.540+491A>G | ||||
| Intron_number | 4/18 | ||||
| Method | WGS_Pasadena_Quinlan |
