WormBase Tree Display for Variation: WBVar00065812
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WBVar00065812 | Evidence | Paper_evidence | WBPaper00030778 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00065812 | |||
Other_name | cbs41418 | ||||
HGVSg | chrII:g.372061T>G | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc0022b | |
Flanking_sequences | tcgtttgcgccactgtactcagattcgcatccattgacaccgaatgtgga | catcgaatacgagttgtggattcttcacaaagttcgtccacatcctcaaa | |||
Mapping_target | cb25.fpc0022b | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | Reference_strain_digest (11) | ||||
Polymorphic_strain_digest (11) | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041077 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00024280 | |||
Transcript | CBG00979.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | CBG00979.1:c.4904T>G | ||||
HGVSp | CBP41590.1:p.Val1635Gly | ||||
cDNA_position | 4904 | ||||
CDS_position | 4904 | ||||
Protein_position | 1635 | ||||
Exon_number | 14/16 | ||||
Codon_change | gTt/gGt | ||||
Amino_acid_change | V/G | ||||
Reference | WBPaper00030778 | ||||
Remark | Predicted by: ssaha-SNP v2.0 | ||||
This SNP was observed in 1 sequencing read(s) | |||||
Method | SNP |