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WormBase Tree Display for Variation: WBVar00065812

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Name Class

WBVar00065812EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00065812
Other_namecbs41418
HGVSgchrII:g.372061T>G
Sequence_detailsSMapS_parentSequencecb25.fpc0022b
Flanking_sequencestcgtttgcgccactgtactcagattcgcatccattgacaccgaatgtggacatcgaatacgagttgtggattcttcacaaagttcgtccacatcctcaaa
Mapping_targetcb25.fpc0022b
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (11)
Polymorphic_strain_digest (11)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00024280
TranscriptCBG00979.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScCBG00979.1:c.4904T>G
HGVSpCBP41590.1:p.Val1635Gly
cDNA_position4904
CDS_position4904
Protein_position1635
Exon_number14/16
Codon_changegTt/gGt
Amino_acid_changeV/G
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP