WormBase Tree Display for Variation: WBVar00092271

WBVar00092271 Name: Public_name: ok1000
    HGVSg: CHROMOSOME_II:g.4902855_4905129del
  Sequence_details: SMap: S_parent: Sequence: R05F9
    Flanking_sequences: aattaattttgacggccacgtgcattgcca cgttaatgtgccagatgctcctgcgcgacg
    Mapping_target: R05F9
    Type_of_mutation: Deletion
    PCR_product: ok1000_external
      ok1000_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031759
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00019893
      WBGene00019888
      WBGene00196322
    Transcript: R05F9.1b.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-122
        CDS_position: ?-71
        Protein_position: ?-24
        Exon_number: 1-2/10
      R05F9.10.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-3/4
        Exon_number: 1-3/5
      R05F9.1d.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-71
        CDS_position: ?-71
        Protein_position: ?-24
        Exon_number: 1/4
      R05F9.14 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5328
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele