WormBase Tree Display for Variation: WBVar00092525

WBVar00092525 Name: Public_name: ok1284
    Other_name: F46G11.3.1:c.622-7_1503del
      F46G11.3.2:c.622-7_1503del
    HGVSg: CHROMOSOME_X:g.5784485_5785788del
  Sequence_details: SMap: S_parent: Sequence: F46G11
    Flanking_sequences: aaataaattttaaatgaaattgaaatctaa cgagacttgtttgactttgacgacctgatg
    Mapping_target: F46G11
    Type_of_mutation: Deletion
    PCR_product: ok1284_external
      ok1284_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036085
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00018516
    Transcript: F46G11.3.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F46G11.3.1:c.622-7_1503del
        cDNA_position: ?-1503
        CDS_position: ?-1503
        Protein_position: ?-501
        Intron_number: 4-7/9
        Exon_number: 5-8/10
      F46G11.3.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F46G11.3.2:c.622-7_1503del
        cDNA_position: ?-2409
        CDS_position: ?-1503
        Protein_position: ?-501
        Intron_number: 5-8/10
        Exon_number: 6-9/11
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5238
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele