WormBase Tree Display for Variation: WBVar00092582

WBVar00092582 Evidence: Paper_evidence: WBPaper00031872
  Name: Public_name: ok1357
    Other_name: C11E4.3a.1:c.691-194_1090delinsC
    HGVSg: CHROMOSOME_X:g.9590754_9591559delinsC
  Sequence_details: SMap: S_parent: Sequence: C11E4
    Flanking_sequences: tggttgttttggattttatagtcgcatact atgtgtggaatagcgcagaagtcaacgagg
    Mapping_target: C11E4
    Type_of_mutation: Insertion: C
      Deletion
    PCR_product: ok1357_external
      ok1357_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036103
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00007518
      WBGene00202031
    Transcript: C11E4.15 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      C11E4.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C11E4.3a.1:c.691-194_1090delinsC
        cDNA_position: ?-1128
        CDS_position: ?-1090
        Protein_position: ?-364
        Intron_number: 6-7/12
        Exon_number: 7-8/13
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 5201
  Description: Phenotype: WBPhenotype:0000016 Paper_evidence: WBPaper00031872
        Curator_confirmed: WBPerson712
        Remark: % animals paralyzed after 60 min on 1mM aldicarb was significantly higher than % N2 animals paralyzed. Paper_evidence: WBPaper00031872
            Curator_confirmed: WBPerson712
        Affected_by: Molecule: WBMol:00003650 Paper_evidence: WBPaper00031872
              Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0007833 PATO:0001549 Paper_evidence: WBPaper00031872
                Curator_confirmed: WBPerson712
      WBPhenotype:0000420 Paper_evidence: WBPaper00031872
        Curator_confirmed: WBPerson712
        Remark: % animals paralyzed after 60 min on 200mM levamisole was significantly higher than % N2 animals paralyzed under the same conditions. Paper_evidence: WBPaper00031872
            Curator_confirmed: WBPerson712
        Affected_by: Molecule: WBMol:00004019 Paper_evidence: WBPaper00031872
              Curator_confirmed: WBPerson712
  Reference: WBPaper00031872
    WBPaper00065804
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele