WormBase Tree Display for Variation: WBVar00092628

WBVar00092628 Name: Public_name: ok1413
    Other_name: C10H11.8b.1:c.462_*60del
      C10H11.8a.1:c.540_*60del
    HGVSg: CHROMOSOME_I:g.4735696_4736465del
  Sequence_details: SMap: S_parent: Sequence: C10H11
    Flanking_sequences: aattttaaaaatgtgtcatgaaagttgcaa tgtgtttgatgtgtgttcggaacgatgctg
    Mapping_target: C10H11
    Type_of_mutation: Deletion
    PCR_product: ok1413_external
      ok1413_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036244
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00015697
    Transcript: C10H11.8b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C10H11.8b.1:c.462_*60del
        cDNA_position: 489-1158
        CDS_position: 462-?
        Protein_position: 154-?
        Intron_number: 5/6
        Exon_number: 5-7/7
      C10H11.8a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C10H11.8a.1:c.540_*60del
        cDNA_position: 540-1209
        CDS_position: 540-?
        Protein_position: 180-?
        Intron_number: 3/4
        Exon_number: 3-5/5
  Isolation: Mutagen: UV/TMP
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele