WormBase Tree Display for Variation: WBVar00092920

WBVar00092920 Name: Public_name: ok1715
    Other_name: K08F11.3.2:c.112+154_539del
      K08F11.3.1:c.112+154_539del
    HGVSg: CHROMOSOME_IV:g.4709356_4710128del
  Sequence_details: SMap: S_parent: Sequence: K08F11
    Flanking_sequences: gcagcctgatcaactctctgatcaacaaga gtttccacatgatatattcaattttttgag
    Mapping_target: K08F11
    Type_of_mutation: Deletion
    PCR_product: OK1715_external
      OK1715_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036432
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00019543
    Transcript: K08F11.3.2 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K08F11.3.2:c.112+154_539del
        cDNA_position: ?-539
        CDS_position: ?-539
        Protein_position: ?-180
        Intron_number: 1/5
        Exon_number: 2/6
      K08F11.3.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K08F11.3.1:c.112+154_539del
        cDNA_position: ?-815
        CDS_position: ?-539
        Protein_position: ?-180
        Intron_number: 2/6
        Exon_number: 3/7
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele