WormBase Tree Display for Variation: WBVar00093345
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| WBVar00093345 | Name | Public_name | ok2174 | ||
|---|---|---|---|---|---|
| Other_name | Y45F10D.13d.1:c.2305-760_2615+39delinsTTTTTCC | ||||
| Y45F10D.13a.1:c.2305-760_2615+39delinsTTTTTCC | |||||
| Y45F10D.13c.1:c.709-760_1019+39delinsTTTTTCC | |||||
| Y45F10D.13e.1:c.709-760_1019+39delinsTTTTTCC | |||||
| HGVSg | CHROMOSOME_IV:g.13768105_13769214delinsTTTTTCC | ||||
| Sequence_details | SMap | S_parent | Sequence | Y45F10D | |
| Flanking_sequences | taaaaccccaaaatcatcattgaaaataaa | aaattgattactgtttcaaaaagttattaa | |||
| Mapping_target | Y45F10D | ||||
| Type_of_mutation | Insertion | TTTTTCC | |||
| Deletion | |||||
| PCR_product | ok2174_external | ||||
| ok2174_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00032411 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012891 | |||
| WBGene00165184 | |||||
| WBGene00169094 | |||||
| WBGene00049955 | |||||
| WBGene00166922 | |||||
| Transcript | Y45F10D.13c.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | Y45F10D.13c.1:c.709-760_1019+39delinsTTTTTCC | ||||
| Intron_number | 5-6/7 | ||||
| Exon_number | 6/8 | ||||
| Y45F10D.73 | |||||
| Y45F10D.49 | |||||
| Y45F10D.13d.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | Y45F10D.13d.1:c.2305-760_2615+39delinsTTTTTCC | ||||
| Intron_number | 11-12/14 | ||||
| Exon_number | 12/15 | ||||
| Y45F10D.13e.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | Y45F10D.13e.1:c.709-760_1019+39delinsTTTTTCC | ||||
| Intron_number | 5-6/7 | ||||
| Exon_number | 6/8 | ||||
| Y45F10D.86 | |||||
| Y45F10D.13a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | Y45F10D.13a.1:c.2305-760_2615+39delinsTTTTTCC | ||||
| Intron_number | 11-12/14 | ||||
| Exon_number | 12/15 | ||||
| Y45F10D.62 | |||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
